Protein

View in Explore
Genbank accession
XYN15800.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,91
TF
Evidence RBPdetect2
Probability 0,94
Seq2Symm
C3 confidence 0,997
C3 0,997
C1 0,036
D3 0,004
Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).
Protein sequence
MANINKISMNLIWGVSGDITAPGPEKMNKGWEVEVVPRQWLNYLQNRLDTNVAYLLQKGLPEWDSETEYQANTSYVQRNGVVYKASRTNTNSEPGTTAGNTNWNRAFQEWSPALESLTALTPTAWRFPFYNASGQATLGGITSYTVGLMGLSSDVAWRAELKAQASASQLTWLSNLTPVAGAIPYFNTATSMANLATTPFGRNWIGVADAATGRSQLQLGSAAVMTATAINQASTVVARDSTGTAAIGTVIGSLTGNASTATRLQTGRNINGVLFDGTQDITLPPLTADYAGIVARLHINGANMSGTDKTTQLALRNKSNTDWISLAVIEDNILQFAFRNTSNPIVQVGGEVVLHTGNQFSLGPTLSDARSRLGLDRVSQGSSDTVVFASTLNNGPYLTVQPTAVGGFNGGTQTWMFRFDETGTLTHGTVPVARVSGLANSAQIPAVTTAQSNSLVQRDSSGSFSAVGINAYGSIIGYGSNIFSRSSGTGNAHIGFQKADGSELGLIWGAPSNGSMNFRTLGGSTGMTLTGQDLTVVGRVNAATLNASGNANVSGNVNVGSATLNTAGNITGPAYGAYNSLTNWVDSVYAKKGEIPNDIARAGAAWDAVGQYILAGDQSGGSGGPGTIRAGSQLKPYSTISYTAGALPAAGQYRCMGAFAGGGNQITLWQRIS
Physico‐chemical
properties
protein length:673 AA
molecular weight: 70175,15560 Da
isoelectric point:8,43867
aromaticity:0,07875
hydropathy:-0,12719

Tail Spike Domain Segmentation

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout
XYN15800.1
1 673 aa
Domain Start End Length (AA) Confidence
N-terminal 1 280 280 0,6359
Central domain 281 479 200 0,1495
C-terminal 480 673 193 0,8910
N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Taxonomy

Phage
Pseudomonas phage NCVTCBPA170 [NCBI] · taxon 3435397
Viruses
Host
Pseudomonas aeruginosa [NCBI] · taxon 287
cellular organisms Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Pseudomonadales

Coding sequence (CDS)

Genbank protein accession
XYN15800.1 [NCBI]
Genbank nucleotide accession
PV733668.1 [NCBI]
CDS location
range 34068 -> 36089
strand +
CDS
ATGGCCAATATCAACAAGATCAGTATGAACCTGATTTGGGGCGTCTCTGGTGATATCACCGCCCCAGGTCCGGAAAAGATGAACAAGGGCTGGGAGGTGGAGGTAGTCCCCCGGCAATGGTTGAACTACCTGCAAAACCGGTTGGACACCAACGTGGCCTACCTGCTCCAGAAGGGCTTGCCTGAGTGGGACAGTGAGACCGAGTATCAGGCAAACACCTCCTATGTACAACGCAACGGTGTAGTGTACAAGGCCTCTCGGACAAATACCAACAGTGAGCCTGGCACGACTGCGGGAAACACCAACTGGAACCGGGCTTTCCAAGAGTGGTCTCCAGCTCTGGAGTCCTTGACGGCGCTTACCCCGACTGCGTGGAGATTCCCGTTCTACAACGCTTCAGGACAAGCAACCCTGGGTGGAATCACCTCCTACACTGTAGGGCTTATGGGTCTTAGCTCCGATGTAGCCTGGCGGGCAGAGCTGAAAGCTCAAGCGAGTGCTTCCCAGCTCACGTGGCTGTCCAACCTGACACCTGTGGCTGGAGCTATCCCGTATTTCAACACGGCTACCTCCATGGCCAACCTGGCAACGACCCCGTTTGGTCGAAACTGGATCGGCGTAGCAGATGCCGCAACGGGCAGGTCGCAGCTTCAACTTGGCAGCGCTGCTGTCATGACGGCCACGGCTATTAATCAGGCGAGCACAGTTGTTGCCAGGGATTCTACAGGAACTGCCGCCATCGGGACGGTGATTGGTAGCCTGACAGGTAACGCTTCAACTGCGACTCGACTGCAAACCGGGAGAAACATCAACGGTGTCCTTTTTGACGGAACCCAGGATATCACGCTCCCACCTCTGACAGCCGATTACGCAGGTATAGTGGCCCGCCTCCACATCAACGGGGCGAACATGTCAGGGACTGATAAAACAACCCAGTTGGCACTCCGAAACAAGTCCAACACGGATTGGATCAGTCTGGCTGTAATAGAAGATAACATCCTCCAGTTTGCTTTCCGAAACACTTCGAACCCCATCGTACAGGTCGGAGGAGAAGTCGTTCTCCACACAGGGAACCAGTTCTCCCTTGGACCAACCCTAAGCGATGCCCGTAGTCGTCTAGGACTTGACCGAGTGTCCCAAGGGTCGTCGGATACCGTGGTATTCGCTAGCACGTTGAATAACGGTCCGTATTTGACCGTCCAACCAACCGCTGTTGGAGGTTTTAACGGGGGAACGCAGACTTGGATGTTCCGATTCGATGAAACTGGGACACTGACCCACGGGACGGTACCAGTTGCAAGAGTGTCCGGCCTGGCAAACTCTGCTCAGATTCCTGCCGTAACTACTGCCCAGTCTAACTCCCTGGTTCAAAGGGATTCAAGCGGGAGCTTTAGTGCGGTAGGCATCAACGCCTACGGAAGCATTATCGGGTATGGATCGAACATTTTCAGCCGCTCCTCTGGTACAGGGAATGCCCACATCGGTTTCCAGAAGGCAGATGGGAGTGAGTTGGGCCTGATTTGGGGTGCTCCGTCCAACGGGTCCATGAACTTCCGGACGCTGGGTGGCTCGACAGGCATGACTCTTACAGGTCAAGACTTGACTGTAGTTGGAAGGGTCAACGCAGCCACGCTCAACGCCTCCGGAAACGCTAACGTTTCAGGCAACGTGAACGTGGGAAGTGCTACCCTCAATACGGCAGGTAACATCACGGGTCCTGCCTACGGGGCGTACAATTCCCTGACCAACTGGGTGGATTCGGTATATGCCAAGAAGGGTGAGATTCCTAACGACATTGCCCGAGCTGGAGCAGCCTGGGACGCCGTAGGGCAGTACATCCTGGCAGGAGACCAGTCAGGCGGGTCGGGGGGCCCTGGCACCATTAGGGCAGGGAGCCAACTGAAACCGTACTCTACCATCAGTTACACCGCAGGGGCACTTCCGGCAGCCGGGCAGTACCGTTGCATGGGAGCGTTTGCAGGGGGTGGTAACCAGATCACCCTGTGGCAACGCATTTCCTAA

Genome Context

Tertiary structure

XYN15800.1
ColabFold structure
Source ColabFold
pLDDT 70.4
Oligomeric state monomer
Download structure