Protein

View in Explore
Genbank accession
XYN15800.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,91
TF
Evidence RBPdetect2
Probability 0,65
Protein sequence
MANINKISMNLIWGVSGDITAPGPEKMNKGWEVEVVPRQWLNYLQNRLDTNVAYLLQKGLPEWDSETEYQANTSYVQRNGVVYKASRTNTNSEPGTTAGNTNWNRAFQEWSPALESLTALTPTAWRFPFYNASGQATLGGITSYTVGLMGLSSDVAWRAELKAQASASQLTWLSNLTPVAGAIPYFNTATSMANLATTPFGRNWIGVADAATGRSQLQLGSAAVMTATAINQASTVVARDSTGTAAIGTVIGSLTGNASTATRLQTGRNINGVLFDGTQDITLPPLTADYAGIVARLHINGANMSGTDKTTQLALRNKSNTDWISLAVIEDNILQFAFRNTSNPIVQVGGEVVLHTGNQFSLGPTLSDARSRLGLDRVSQGSSDTVVFASTLNNGPYLTVQPTAVGGFNGGTQTWMFRFDETGTLTHGTVPVARVSGLANSAQIPAVTTAQSNSLVQRDSSGSFSAVGINAYGSIIGYGSNIFSRSSGTGNAHIGFQKADGSELGLIWGAPSNGSMNFRTLGGSTGMTLTGQDLTVVGRVNAATLNASGNANVSGNVNVGSATLNTAGNITGPAYGAYNSLTNWVDSVYAKKGEIPNDIARAGAAWDAVGQYILAGDQSGGSGGPGTIRAGSQLKPYSTISYTAGALPAAGQYRCMGAFAGGGNQITLWQRIS
Physico‐chemical
properties
protein length:673 AA
molecular weight: 70175,15560 Da
isoelectric point:8,43867
aromaticity:0,07875
hydropathy:-0,12719

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XYN15800.1
1 673
Domain Start End Length (AA) Confidence
N-terminal 1 280 280 0,6359
Central domain 281 479 200 0,1495
C-terminal 480 673 193 0,8910
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-280
Central
281-479
C-terminal
480-673

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage NCVTCBPA170
[NCBI] 		3435397 Viruses >
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XYN15800.1 [NCBI]
Genbank nucleotide accession
PV733668.1 [NCBI]
CDS location
range 34068 -> 36089
strand +
CDS
ATGGCCAATATCAACAAGATCAGTATGAACCTGATTTGGGGCGTCTCTGGTGATATCACCGCCCCAGGTCCGGAAAAGATGAACAAGGGCTGGGAGGTGGAGGTAGTCCCCCGGCAATGGTTGAACTACCTGCAAAACCGGTTGGACACCAACGTGGCCTACCTGCTCCAGAAGGGCTTGCCTGAGTGGGACAGTGAGACCGAGTATCAGGCAAACACCTCCTATGTACAACGCAACGGTGTAGTGTACAAGGCCTCTCGGACAAATACCAACAGTGAGCCTGGCACGACTGCGGGAAACACCAACTGGAACCGGGCTTTCCAAGAGTGGTCTCCAGCTCTGGAGTCCTTGACGGCGCTTACCCCGACTGCGTGGAGATTCCCGTTCTACAACGCTTCAGGACAAGCAACCCTGGGTGGAATCACCTCCTACACTGTAGGGCTTATGGGTCTTAGCTCCGATGTAGCCTGGCGGGCAGAGCTGAAAGCTCAAGCGAGTGCTTCCCAGCTCACGTGGCTGTCCAACCTGACACCTGTGGCTGGAGCTATCCCGTATTTCAACACGGCTACCTCCATGGCCAACCTGGCAACGACCCCGTTTGGTCGAAACTGGATCGGCGTAGCAGATGCCGCAACGGGCAGGTCGCAGCTTCAACTTGGCAGCGCTGCTGTCATGACGGCCACGGCTATTAATCAGGCGAGCACAGTTGTTGCCAGGGATTCTACAGGAACTGCCGCCATCGGGACGGTGATTGGTAGCCTGACAGGTAACGCTTCAACTGCGACTCGACTGCAAACCGGGAGAAACATCAACGGTGTCCTTTTTGACGGAACCCAGGATATCACGCTCCCACCTCTGACAGCCGATTACGCAGGTATAGTGGCCCGCCTCCACATCAACGGGGCGAACATGTCAGGGACTGATAAAACAACCCAGTTGGCACTCCGAAACAAGTCCAACACGGATTGGATCAGTCTGGCTGTAATAGAAGATAACATCCTCCAGTTTGCTTTCCGAAACACTTCGAACCCCATCGTACAGGTCGGAGGAGAAGTCGTTCTCCACACAGGGAACCAGTTCTCCCTTGGACCAACCCTAAGCGATGCCCGTAGTCGTCTAGGACTTGACCGAGTGTCCCAAGGGTCGTCGGATACCGTGGTATTCGCTAGCACGTTGAATAACGGTCCGTATTTGACCGTCCAACCAACCGCTGTTGGAGGTTTTAACGGGGGAACGCAGACTTGGATGTTCCGATTCGATGAAACTGGGACACTGACCCACGGGACGGTACCAGTTGCAAGAGTGTCCGGCCTGGCAAACTCTGCTCAGATTCCTGCCGTAACTACTGCCCAGTCTAACTCCCTGGTTCAAAGGGATTCAAGCGGGAGCTTTAGTGCGGTAGGCATCAACGCCTACGGAAGCATTATCGGGTATGGATCGAACATTTTCAGCCGCTCCTCTGGTACAGGGAATGCCCACATCGGTTTCCAGAAGGCAGATGGGAGTGAGTTGGGCCTGATTTGGGGTGCTCCGTCCAACGGGTCCATGAACTTCCGGACGCTGGGTGGCTCGACAGGCATGACTCTTACAGGTCAAGACTTGACTGTAGTTGGAAGGGTCAACGCAGCCACGCTCAACGCCTCCGGAAACGCTAACGTTTCAGGCAACGTGAACGTGGGAAGTGCTACCCTCAATACGGCAGGTAACATCACGGGTCCTGCCTACGGGGCGTACAATTCCCTGACCAACTGGGTGGATTCGGTATATGCCAAGAAGGGTGAGATTCCTAACGACATTGCCCGAGCTGGAGCAGCCTGGGACGCCGTAGGGCAGTACATCCTGGCAGGAGACCAGTCAGGCGGGTCGGGGGGCCCTGGCACCATTAGGGCAGGGAGCCAACTGAAACCGTACTCTACCATCAGTTACACCGCAGGGGCACTTCCGGCAGCCGGGCAGTACCGTTGCATGGGAGCGTTTGCAGGGGGTGGTAACCAGATCACCCTGTGGCAACGCATTTCCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
30f193b8c95ded48c87d98de7a8f5d390a47207c6cfcee888c5c7e9c08d69934
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7038
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50