Protein

View in Explore
Genbank accession
AIX32438.1 [GenBank]
Protein name
tail fiber
RBP type
TSP
Evidence DepoScope
Probability 0,99
TSP
Evidence RBPdetect
Probability 0,81
TF
Evidence RBPdetect2
Probability 0,96
TF
Evidence Phold
Probability 1,00
Protein sequence
MAFKINGVVRIDNSGNGFLGIVTATDANITGVLTATEVDAKVSSKAITEQTDGTVDDVTGADELLLLDAETGGLLRVSIDEFVQGSGIGTLVTDFDNLTVTGITTVATLKGIGSNNISVGSTLSFADGTEIIMGDSGDFSIHHDGDHTYLDETGQGNLKLRTNNFRVTNIAETKPAITAQVTSGVELYFDGNKKIETTNTGVLVSGMLTADRLRSGDIAARNVITLGITTIQDHLEVNDSTGSGTEYNLNVKTNGSSTFGVLGNGNILLGNSSGAPFMATNDHHATSKKYVDDAIDDSVSYIGASAWGSFNSDGTTEGAFNCSATRGSAGEYVVTFTTALSDSDYAVNATSNGSSNYDVFIDNKATTGFTVSTRNALSANAGDQAFCVSIHGANAIAPPSGVGADAWGTFSGTTGDLQAGMNISSTTRTALGEYDVEFITEMPSDSEYAVTAVSNASQAKFINIRNKSTSGFKVVTRDGSGNISDGAVSFAVHASSTVTPTYTWTRDGTTLKPANDGDDVEVNGRGLFESSQPADYVVRVKNTDTGTINPACLLLDMRDVDASNNYSALRVVGYNTTTGLDINSDGAITAQGQITANVSNQGGENSAIKAIQTNSNGYAVWVGDGPNSTDRTASIGPDGRATFSSGKISLGPTGSGTFADNNIFLQSDGQVRCTNVITSSALAGSGTRPLYVDSSGGLTISSSDRSLKTNITTLPDQIQVVKALNPVSFNWIEKERLGAGLEIGFIAQEVEEIVPEVVRSTAGILSVDYAKLTATLTSALQAALTRIEALEAKVQSLEEGVTPD
Physico‐chemical
properties
protein length:804 AA
molecular weight: 83438,51260 Da
isoelectric point:4,41692
aromaticity:0,06095
hydropathy:-0,13781

Domains

Domains [InterPro]
IPR036388
695–760
IPR036388 Coil
IPR030392
703–794
IPR030392
IPR030392
703–759
IPR030392
AIX32438.1
1 804
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage ACG-2014f
[NCBI] 		1493511 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Synechococcus sp. WH 7803
[NCBI] 		32051 Bacteria > Cyanobacteria > Oscillatoriophycideae > Chroococcales > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AIX32438.1 [NCBI]
Genbank nucleotide accession
KJ019103.1 [NCBI]
CDS location
range 169318 -> 171732
strand +
CDS
ATGGCATTTAAGATTAATGGCGTAGTACGCATTGATAATAGTGGCAACGGTTTTCTGGGAATTGTAACCGCTACCGACGCTAATATCACAGGAGTTCTCACTGCCACTGAGGTGGATGCGAAAGTATCATCTAAGGCAATAACTGAACAAACAGATGGAACCGTAGATGATGTAACTGGTGCAGATGAACTATTACTATTAGATGCTGAGACTGGTGGATTACTAAGAGTATCAATAGATGAGTTCGTGCAGGGTTCAGGCATTGGAACTCTAGTAACGGACTTTGATAACTTAACTGTTACTGGTATCACAACCGTTGCCACCCTCAAAGGTATTGGATCTAATAACATCAGTGTAGGGAGCACACTTTCCTTTGCTGATGGTACAGAGATCATCATGGGTGACTCTGGTGACTTCAGTATTCATCATGATGGTGACCATACTTACCTAGATGAGACGGGGCAGGGTAATCTAAAACTCCGTACAAATAACTTTAGAGTAACAAATATAGCAGAAACAAAACCAGCTATTACAGCACAGGTTACTTCTGGTGTTGAGTTGTATTTTGATGGTAATAAGAAGATAGAAACTACAAATACTGGTGTTCTTGTGAGTGGTATGCTCACTGCTGATAGATTAAGATCAGGTGATATTGCTGCTAGAAATGTAATCACACTGGGTATTACCACTATCCAAGATCATTTGGAAGTGAATGATAGTACTGGTTCTGGTACCGAATACAATCTCAATGTTAAGACCAATGGTAGTTCTACCTTTGGTGTCTTAGGTAATGGAAATATTCTACTTGGAAACAGTTCCGGTGCTCCATTCATGGCGACGAATGATCACCACGCAACTTCCAAGAAGTATGTGGATGATGCTATTGATGATTCCGTCAGCTACATCGGTGCTAGTGCTTGGGGTTCTTTTAATTCTGACGGGACGACTGAAGGTGCTTTCAACTGTAGTGCAACTAGAGGATCAGCAGGGGAATACGTGGTTACCTTTACCACTGCATTGTCTGATTCGGATTATGCAGTGAACGCCACTAGTAATGGCTCTAGTAATTATGACGTTTTTATTGATAATAAAGCAACGACAGGTTTTACAGTAAGCACTAGAAATGCGTTAAGTGCAAACGCCGGTGATCAGGCTTTTTGTGTATCCATCCACGGTGCTAATGCAATTGCACCGCCGTCAGGCGTAGGCGCTGACGCCTGGGGAACATTCTCTGGAACGACTGGCGACCTGCAAGCTGGGATGAATATCAGCTCAACTACACGTACTGCCCTAGGAGAATATGACGTAGAATTTATAACCGAGATGCCTTCGGACTCAGAATATGCCGTAACCGCAGTATCTAATGCAAGTCAAGCAAAGTTTATTAATATACGCAATAAGTCTACAAGTGGTTTTAAGGTTGTAACTAGAGATGGTTCTGGAAATATTTCTGACGGAGCCGTATCCTTTGCCGTCCACGCATCATCAACAGTCACGCCAACCTATACCTGGACACGCGACGGCACAACGCTTAAGCCTGCTAATGATGGTGATGATGTAGAGGTGAACGGTCGGGGCCTTTTCGAAAGCAGCCAGCCGGCTGACTATGTTGTGAGAGTAAAAAACACCGACACAGGTACTATCAATCCCGCATGTTTGCTGCTGGACATGCGAGATGTTGACGCTTCTAATAATTATTCAGCCTTAAGGGTAGTAGGTTACAACACTACAACAGGTCTTGATATAAATTCAGACGGCGCTATCACGGCTCAGGGGCAGATAACCGCAAACGTCAGTAACCAAGGCGGAGAGAATAGTGCAATCAAGGCAATTCAAACCAACTCCAACGGGTATGCGGTATGGGTTGGTGATGGACCTAACTCTACAGATAGAACCGCTTCTATAGGCCCTGATGGAAGAGCCACGTTTTCCTCCGGCAAAATTTCGCTGGGTCCGACCGGCTCGGGGACGTTTGCAGACAATAACATCTTCCTGCAGTCGGACGGACAAGTCAGATGCACGAACGTAATTACATCTTCAGCTTTGGCAGGCTCAGGCACCAGACCATTATATGTCGACTCATCTGGTGGTTTAACTATCAGCTCTTCTGATCGTAGTTTGAAGACGAACATCACTACTCTTCCTGATCAGATACAAGTAGTCAAAGCATTAAATCCCGTTTCGTTTAATTGGATAGAGAAAGAAAGACTAGGTGCAGGTCTTGAAATTGGATTTATTGCTCAAGAAGTAGAAGAAATCGTTCCTGAGGTTGTTCGTAGCACTGCCGGAATACTTTCAGTAGATTATGCAAAATTAACCGCAACTTTAACGTCTGCCCTACAGGCAGCACTCACCCGCATCGAAGCCCTCGAAGCGAAAGTCCAATCACTCGAAGAAGGTGTGACACCTGACTAA

Tertiary structure

PDB ID
57bed1d0acf6ea8c81b580adc9efb5a8ede0a76087d5021097681d3b6c295251
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6619
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Ecological redundancy of diverse viral populations within a natural community Gregory,A.C., LaButti,K., Copeland,A., Woyke,T. and Sullivan,M.B. 2015-03-20 — GenBank