Protein

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Genbank accession
YP_009286362.1 [GenBank]
Protein name
tail fiber protein; host specificity
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,66
TF
Evidence RBPdetect2
Probability 1,00
Seq2Symm
C3 confidence 0,949
C3 0,949
C1 0,173
C2 0,002
Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).
Protein sequence
MTIVASNSLTVSNVSDGTGIANVTNFYLASNQSTGIEKPADVVNLIRNGAYPTNTNYWSGAMIVSQHDFYYNGQKKLFLLQTTGASEIVASSYRFDVKRNTNYSLSFYALAAGNVKNADVYFLGRKSNETNDFTSVNLIINQRRFSGSKAEYVTITFNSGDNDNGYIRFDNNGSSDGNNAVLFFGEVMLVEGRDPKPWVAAIEDSGWTRIPQQTTNNNRFLWNYRIDLYTDGVTKTIEPTVIGVYGEKGDPGNDGIAGKDGVGIKTTVITYAISTSGTTAPNTGWTSSVPSLVKGQYLWTKTVWTYTDNSSETGYSVTYIAKDGNNGNDGIAGKDGVGIKTTTITYAGSTSGTTAPTDGWTSTVPTVAAGSYLWTKTLWTYTDNSFETGYSVAKMGNNGTPGPQGPPGSNGDPGKIVSDTEPSTRFKGLTWKYSGTTDLTASDGTVIKPNTEYYYNGTHWMINYLSANNLEANSITADLIDAKNLTITDGEFISKTTNGPVTTSTEIKDNHIAISKTDGTVNTRNDIALDSEQGLAQKFTNINTGFYRTAGINYQGPFTSDSDGNYAQLTPQGTKLSTDVPWTTLSTTNGFSGGLFQFSVQNRVEFFSISGLGVPQMNANQWYQATSLPAGSSAIPSVNRVYTISGNNNAWDLLINPAGGIFIRCQASVSATSNLVNGGCGFPIG
Physico‐chemical
properties
protein length:685 AA
molecular weight: 73530,91470 Da
isoelectric point:5,03454
aromaticity:0,10803
hydropathy:-0,38015

Domains

View on InterPro

No domain architecture available.

Taxonomy

Phage
Lactococcus phage 98201 [NCBI] · taxon 1871690
Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes
Host
Lactococcus lactis [NCBI] · taxon 1358
cellular organisms Bacteria Bacillati Bacillota Bacilli Lactobacillales

Coding sequence (CDS)

Genbank protein accession
YP_009286362.1 [NCBI]
Genbank nucleotide accession
NC_031064.1 [NCBI]
CDS location
range 32153 -> 34210
strand +
CDS
ATGACGATAGTAGCAAGCAATAGCCTCACCGTAAGTAATGTTTCAGATGGTACAGGAATAGCTAATGTGACTAATTTTTATTTAGCAAGTAATCAATCAACAGGTATTGAAAAACCAGCAGATGTAGTGAACCTCATCCGAAATGGGGCATATCCAACCAATACTAATTATTGGTCTGGGGCGATGATTGTGTCACAACATGACTTTTACTACAACGGACAAAAAAAACTCTTTTTGTTGCAGACTACTGGAGCTTCAGAAATAGTAGCATCATCCTATCGCTTTGATGTAAAGCGGAACACAAACTACTCACTATCTTTTTATGCACTTGCTGCAGGCAACGTAAAAAATGCTGACGTTTATTTCCTTGGACGAAAATCAAATGAAACCAATGATTTTACATCTGTTAATCTAATCATTAATCAACGTAGATTTTCAGGTTCAAAAGCCGAGTATGTCACCATTACATTTAACTCTGGTGATAATGATAATGGCTATATTCGTTTCGACAATAATGGTTCGAGCGATGGAAATAATGCAGTGTTATTTTTTGGTGAGGTTATGCTAGTTGAGGGGAGAGATCCGAAACCATGGGTAGCAGCTATTGAAGATAGTGGTTGGACAAGGATACCTCAACAAACAACAAATAATAATCGTTTTTTATGGAACTATCGCATTGATCTTTATACCGATGGAGTAACTAAAACAATAGAGCCTACAGTTATTGGTGTCTATGGCGAAAAAGGTGACCCTGGTAATGATGGAATAGCAGGTAAAGATGGCGTTGGTATCAAAACCACTGTTATTACTTATGCTATTTCAACAAGCGGAACGACAGCACCAAATACCGGTTGGACAAGTTCAGTTCCCAGTCTTGTAAAAGGTCAGTATCTCTGGACGAAAACAGTATGGACATACACGGACAACTCATCTGAAACAGGTTACTCAGTAACTTATATTGCAAAAGACGGAAATAACGGTAATGACGGAATTGCTGGTAAAGATGGTGTTGGTATCAAAACTACGACCATTACATATGCAGGCTCAACAAGTGGAACAACGGCACCAACAGACGGTTGGACTTCCACAGTTCCGACAGTTGCTGCAGGTAGTTATCTCTGGACTAAGACATTATGGACGTACACGGACAACTCATTTGAAACAGGGTACTCAGTAGCTAAAATGGGAAATAATGGAACACCTGGTCCGCAAGGTCCTCCTGGAAGTAATGGTGACCCTGGTAAAATCGTTTCCGATACTGAGCCAAGCACTCGATTCAAAGGATTGACTTGGAAATACTCAGGAACAACAGACCTTACAGCGAGTGATGGAACAGTGATTAAGCCAAATACAGAGTATTACTATAATGGCACTCATTGGATGATTAACTATTTAAGTGCGAATAATCTTGAAGCTAACTCAATAACTGCTGACTTAATTGATGCAAAAAATTTAACCATAACTGATGGAGAGTTCATTAGTAAAACAACTAATGGACCAGTTACAACCTCTACTGAAATTAAAGATAATCATATTGCAATTTCAAAGACAGACGGAACTGTTAATACTAGAAATGATATAGCGCTTGATTCTGAACAAGGACTAGCTCAGAAATTTACGAACATTAATACAGGCTTCTATAGAACAGCTGGGATTAATTATCAAGGTCCATTCACAAGTGACTCAGATGGAAACTATGCTCAACTTACGCCTCAAGGCACGAAGTTATCAACTGATGTTCCTTGGACAACATTATCTACGACAAATGGATTTAGTGGCGGTTTATTTCAATTTTCTGTACAAAACAGGGTTGAATTTTTCTCTATTTCAGGTTTGGGTGTCCCTCAGATGAATGCAAACCAATGGTATCAAGCTACTTCGCTTCCAGCAGGAAGCAGTGCAATTCCTAGTGTAAATAGAGTATATACGATATCAGGGAATAATAATGCATGGGATCTACTTATTAATCCAGCAGGAGGTATTTTTATAAGGTGCCAAGCATCAGTATCAGCAACTTCAAATTTAGTTAATGGTGGATGTGGTTTCCCAATAGGATAA

Genome Context

Tertiary structure

YP_009286362.1
ESMFold structure
Source ESMFold
pLDDT 81.8
Oligomeric state monomer
Download structure

Literature

Title Authors Date PMID Source
Genome sequence of eight prophages isolated from Lactococcus lactis dairy strains Oliveira,J. and van Sinderen,D. 2016-12-29 — GenBank