Protein

View in Explore
Genbank accession
YP_009286362.1 [GenBank]
Protein name
tail fiber protein; host specificity
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,66
TF
Evidence RBPdetect2
Probability 0,81
Protein sequence
MTIVASNSLTVSNVSDGTGIANVTNFYLASNQSTGIEKPADVVNLIRNGAYPTNTNYWSGAMIVSQHDFYYNGQKKLFLLQTTGASEIVASSYRFDVKRNTNYSLSFYALAAGNVKNADVYFLGRKSNETNDFTSVNLIINQRRFSGSKAEYVTITFNSGDNDNGYIRFDNNGSSDGNNAVLFFGEVMLVEGRDPKPWVAAIEDSGWTRIPQQTTNNNRFLWNYRIDLYTDGVTKTIEPTVIGVYGEKGDPGNDGIAGKDGVGIKTTVITYAISTSGTTAPNTGWTSSVPSLVKGQYLWTKTVWTYTDNSSETGYSVTYIAKDGNNGNDGIAGKDGVGIKTTTITYAGSTSGTTAPTDGWTSTVPTVAAGSYLWTKTLWTYTDNSFETGYSVAKMGNNGTPGPQGPPGSNGDPGKIVSDTEPSTRFKGLTWKYSGTTDLTASDGTVIKPNTEYYYNGTHWMINYLSANNLEANSITADLIDAKNLTITDGEFISKTTNGPVTTSTEIKDNHIAISKTDGTVNTRNDIALDSEQGLAQKFTNINTGFYRTAGINYQGPFTSDSDGNYAQLTPQGTKLSTDVPWTTLSTTNGFSGGLFQFSVQNRVEFFSISGLGVPQMNANQWYQATSLPAGSSAIPSVNRVYTISGNNNAWDLLINPAGGIFIRCQASVSATSNLVNGGCGFPIG
Physico‐chemical
properties
protein length:685 AA
molecular weight: 73530,91470 Da
isoelectric point:5,03454
aromaticity:0,10803
hydropathy:-0,38015

Domains

Domains [InterPro]
DC_1418
STR
2–250
DC_1418 DC_1328
DC_1328
STR
324–673
DC_1328
YP_009286362.1
1 685
Architecture
STR
STR 2-673 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Lactococcus phage 98201
[NCBI] 		1871690 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Lactococcus lactis
[NCBI] 		1358 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009286362.1 [NCBI]
Genbank nucleotide accession
NC_031064.1 [NCBI]
CDS location
range 32153 -> 34210
strand +
CDS
ATGACGATAGTAGCAAGCAATAGCCTCACCGTAAGTAATGTTTCAGATGGTACAGGAATAGCTAATGTGACTAATTTTTATTTAGCAAGTAATCAATCAACAGGTATTGAAAAACCAGCAGATGTAGTGAACCTCATCCGAAATGGGGCATATCCAACCAATACTAATTATTGGTCTGGGGCGATGATTGTGTCACAACATGACTTTTACTACAACGGACAAAAAAAACTCTTTTTGTTGCAGACTACTGGAGCTTCAGAAATAGTAGCATCATCCTATCGCTTTGATGTAAAGCGGAACACAAACTACTCACTATCTTTTTATGCACTTGCTGCAGGCAACGTAAAAAATGCTGACGTTTATTTCCTTGGACGAAAATCAAATGAAACCAATGATTTTACATCTGTTAATCTAATCATTAATCAACGTAGATTTTCAGGTTCAAAAGCCGAGTATGTCACCATTACATTTAACTCTGGTGATAATGATAATGGCTATATTCGTTTCGACAATAATGGTTCGAGCGATGGAAATAATGCAGTGTTATTTTTTGGTGAGGTTATGCTAGTTGAGGGGAGAGATCCGAAACCATGGGTAGCAGCTATTGAAGATAGTGGTTGGACAAGGATACCTCAACAAACAACAAATAATAATCGTTTTTTATGGAACTATCGCATTGATCTTTATACCGATGGAGTAACTAAAACAATAGAGCCTACAGTTATTGGTGTCTATGGCGAAAAAGGTGACCCTGGTAATGATGGAATAGCAGGTAAAGATGGCGTTGGTATCAAAACCACTGTTATTACTTATGCTATTTCAACAAGCGGAACGACAGCACCAAATACCGGTTGGACAAGTTCAGTTCCCAGTCTTGTAAAAGGTCAGTATCTCTGGACGAAAACAGTATGGACATACACGGACAACTCATCTGAAACAGGTTACTCAGTAACTTATATTGCAAAAGACGGAAATAACGGTAATGACGGAATTGCTGGTAAAGATGGTGTTGGTATCAAAACTACGACCATTACATATGCAGGCTCAACAAGTGGAACAACGGCACCAACAGACGGTTGGACTTCCACAGTTCCGACAGTTGCTGCAGGTAGTTATCTCTGGACTAAGACATTATGGACGTACACGGACAACTCATTTGAAACAGGGTACTCAGTAGCTAAAATGGGAAATAATGGAACACCTGGTCCGCAAGGTCCTCCTGGAAGTAATGGTGACCCTGGTAAAATCGTTTCCGATACTGAGCCAAGCACTCGATTCAAAGGATTGACTTGGAAATACTCAGGAACAACAGACCTTACAGCGAGTGATGGAACAGTGATTAAGCCAAATACAGAGTATTACTATAATGGCACTCATTGGATGATTAACTATTTAAGTGCGAATAATCTTGAAGCTAACTCAATAACTGCTGACTTAATTGATGCAAAAAATTTAACCATAACTGATGGAGAGTTCATTAGTAAAACAACTAATGGACCAGTTACAACCTCTACTGAAATTAAAGATAATCATATTGCAATTTCAAAGACAGACGGAACTGTTAATACTAGAAATGATATAGCGCTTGATTCTGAACAAGGACTAGCTCAGAAATTTACGAACATTAATACAGGCTTCTATAGAACAGCTGGGATTAATTATCAAGGTCCATTCACAAGTGACTCAGATGGAAACTATGCTCAACTTACGCCTCAAGGCACGAAGTTATCAACTGATGTTCCTTGGACAACATTATCTACGACAAATGGATTTAGTGGCGGTTTATTTCAATTTTCTGTACAAAACAGGGTTGAATTTTTCTCTATTTCAGGTTTGGGTGTCCCTCAGATGAATGCAAACCAATGGTATCAAGCTACTTCGCTTCCAGCAGGAAGCAGTGCAATTCCTAGTGTAAATAGAGTATATACGATATCAGGGAATAATAATGCATGGGATCTACTTATTAATCCAGCAGGAGGTATTTTTATAAGGTGCCAAGCATCAGTATCAGCAACTTCAAATTTAGTTAATGGTGGATGTGGTTTCCCAATAGGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
e2b8590367e0630999b3c7fa43c76cc77c98d3c79a362d9f890ffb6b030d1b6d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8177
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genome sequence of eight prophages isolated from Lactococcus lactis dairy strains Oliveira,J. and van Sinderen,D. 2016-12-29 — GenBank