Protein

View in Explore
Genbank accession
UHS65533.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,96
Seq2Symm
C3 confidence 1,000
C3 1,000
C1 0,014
D3 0,002
Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).
Protein sequence
MTRNVESIFGAVVTAPHQIPYTYTATGGEKFISLPFYPVTGIVTINGGMQVPLDNFEIDGNTLNLGRALSKGDVVFCLFDKILSPEDYKTGIRIYKFQAIGGETEFTPDYTSYGVQSLYIGGEYKTPEIEYSYDSTTGKVSLQTALTAGVWVVAEMSVKQPNISPLFDRSIQEIARATNVKDSEVILSTDTTQSLNGKKIIYSVSEQKAYGLPTLPTNVYISSVNGDQLTYNPGGIVVDLLPAPNDVTPVENELQVYKTAMVTDGGTLVNSGLSGVSSAIKRTIDSHFKDYYNVKDFGAVGDGATDDTVAIKAAIAYASTTKGVVYFPDGNYKISSTLALPSNVSVIGRSRESVTITKTTSTTVTVLVTAPALSGGYTGTLPTDMNAVICLGDSSSSRWSGVITGVTLHGTKTTTENHAVEFGIVNAGVVSDATIEDVYIYDCKYGLILPVVFASRVGNNRVTACLGGIFINNGTSCVISTNYSNSCRDYGHCYRDLKYSVIEANACDHTNRNDYYPDRTRVCYGYILQNLLGVTVTGNGQEGTLGINWRLDNFDHSSFTNNTSIRLGSDYTGPSNISWLELNGVARNSIIENNVSYEYNSNGMLFGGAVAGQHHNIYISDITFFNAILRNNIVRSTRNGDPVEAGWLNNVTRTVANSSAKIRPDRTFLANDPGSPEITVQSGTNAVISYGEYTVHNINYVGDFAHIFGVFDVTIEWSSGTSQFISVTGFPVARDYAYIAVTGVNNGDIGFTSGNIPASFRMNIGNTGGAFFTEGEKTLRIDAVVSGKRLYISYDGWYRVSP
Physico‐chemical
properties
protein length:802 AA
molecular weight: 86629,67520 Da
isoelectric point:5,14071
aromaticity:0,10224
hydropathy:-0,09763

Domains

View on InterPro
Domain architecture
UHS65533.1
1 802 aa
ATT 155–245 · STR 251–666 ·
ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped
Proteins with similar domain architecture

Tail Spike Domain Segmentation

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout
UHS65533.1
1 802 aa
Domain Start End Length (AA) Confidence
N-terminal 1 303 303 0,9865
Central domain 304 667 365 0,9910
C-terminal 668 802 134 0,9839
N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Taxonomy

Phage
Escherichia phage vB_EcoM-RPN242 [NCBI] · taxon 2900331
Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes
Host
Escherichia coli [NCBI] · taxon 562
cellular organisms Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales

Coding sequence (CDS)

Genbank protein accession
UHS65533.1 [NCBI]
Genbank nucleotide accession
OL656110.1 [NCBI]
CDS location
range 120540 -> 122948
strand -
CDS
ATGACCAGAAACGTCGAGAGCATCTTTGGAGCGGTCGTAACAGCTCCGCACCAGATTCCATACACTTACACAGCAACGGGCGGAGAGAAGTTTATCTCCCTCCCTTTCTACCCTGTCACTGGTATAGTCACAATCAACGGTGGTATGCAAGTTCCGTTAGACAACTTTGAAATCGATGGAAATACGTTAAATCTCGGACGCGCATTATCCAAAGGTGACGTTGTGTTCTGTCTGTTTGATAAGATTCTGTCTCCAGAAGATTATAAAACTGGGATTCGAATCTATAAGTTTCAGGCTATAGGAGGTGAAACCGAGTTCACTCCTGATTACACATCTTATGGAGTCCAATCTCTTTATATCGGTGGTGAGTACAAAACACCCGAAATTGAATATTCCTATGACAGCACGACAGGGAAAGTGTCTTTACAAACTGCGCTGACAGCAGGCGTTTGGGTAGTCGCTGAAATGTCTGTTAAACAACCGAATATCAGTCCGTTGTTTGACCGAAGTATTCAAGAAATCGCTCGTGCTACTAACGTTAAAGATAGTGAAGTAATTCTTAGCACCGATACTACTCAGTCCCTCAATGGTAAGAAGATTATTTATTCTGTTAGTGAGCAGAAGGCATATGGGTTGCCTACATTGCCTACTAACGTATATATTTCTTCCGTTAATGGTGACCAACTAACATACAATCCTGGTGGGATTGTTGTTGACCTGCTCCCTGCACCCAATGATGTAACTCCAGTGGAGAATGAGTTGCAGGTATATAAAACGGCTATGGTTACTGATGGGGGAACATTAGTAAATTCTGGCTTATCTGGTGTTTCTTCTGCAATTAAGCGAACCATTGATAGCCATTTTAAAGACTACTATAACGTTAAAGATTTTGGTGCTGTTGGTGACGGAGCTACTGATGATACGGTAGCTATAAAAGCAGCTATAGCTTATGCCAGCACCACAAAAGGCGTGGTTTATTTCCCGGATGGTAACTATAAAATAAGCAGTACTCTTGCTCTACCATCGAATGTATCAGTAATAGGGAGAAGTCGCGAATCAGTTACTATAACGAAAACGACATCCACTACCGTTACAGTTCTGGTGACGGCGCCTGCACTATCTGGAGGATATACCGGAACCCTGCCTACAGATATGAATGCGGTTATTTGTTTAGGGGATTCTAGTAGTTCAAGATGGTCCGGTGTCATCACAGGGGTTACTCTGCATGGGACAAAAACTACAACGGAAAACCACGCGGTAGAATTTGGTATCGTAAATGCAGGCGTGGTATCCGACGCCACGATAGAAGACGTCTATATTTACGATTGCAAGTATGGGCTAATTCTCCCTGTTGTATTTGCGTCGCGAGTAGGAAACAACCGCGTTACCGCATGTCTCGGTGGGATATTTATAAACAACGGCACTTCATGCGTAATATCTACTAACTATAGTAATAGTTGCCGTGATTATGGGCATTGCTATCGGGATCTTAAATACTCTGTTATAGAGGCTAATGCCTGTGATCACACTAACAGGAACGACTATTATCCGGACAGGACAAGAGTGTGTTATGGCTATATATTACAGAACCTGCTAGGGGTAACGGTAACTGGGAATGGTCAAGAAGGCACTCTGGGTATTAACTGGAGATTGGATAATTTCGACCATAGCTCATTCACCAATAACACCAGTATTAGACTTGGTTCTGATTACACAGGCCCGTCTAACATATCATGGCTAGAATTAAATGGAGTGGCGCGCAACAGCATCATTGAGAACAACGTATCTTATGAGTACAACTCTAATGGGATGTTGTTTGGCGGGGCCGTAGCCGGGCAGCACCATAATATTTACATCTCCGATATTACGTTTTTTAACGCAATATTGCGTAACAACATTGTAAGGTCTACGCGAAATGGGGATCCGGTGGAGGCCGGTTGGCTCAACAACGTTACCAGAACGGTGGCGAATTCATCCGCCAAAATCAGACCAGACCGTACTTTCTTAGCGAATGACCCCGGTTCGCCTGAAATTACAGTTCAATCAGGCACCAATGCGGTGATATCATACGGCGAGTATACCGTACATAACATAAATTATGTCGGAGATTTTGCTCATATATTCGGTGTGTTTGATGTGACAATTGAATGGAGTTCCGGCACCAGTCAGTTCATATCTGTGACAGGATTTCCTGTCGCGCGGGATTACGCATACATAGCAGTAACAGGGGTGAACAACGGGGACATCGGTTTTACCTCTGGAAATATTCCAGCCAGCTTTCGAATGAACATCGGGAACACTGGAGGAGCGTTCTTTACTGAAGGTGAAAAAACGCTTCGCATTGATGCAGTTGTGTCCGGTAAACGTTTGTATATTAGCTACGACGGGTGGTATCGGGTTAGCCCTTAA

Genome Context

Tertiary structure

UHS65533.1
ESMFold structure
Source ESMFold
pLDDT 72.7
Oligomeric state monomer
Download structure

Literature

Title Authors Date PMID Source
Characterization and complete genome analysis of a novel Escherichia phage, vB_EcoM-RPN242 Imklin,N., Sriprasong,P., Thanantong,N., Lekcharoensuk,P. and Nasanit,R. — 35598209 GenBank