Protein

View in Explore
Genbank accession
UPW35234.1 [GenBank]
Protein name
tail fibers protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,99
Seq2Symm
C6 confidence 0,972
C6 0,972
C3 0,428
C7-C9 0,001
Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).
Protein sequence
MADAPKTTVTYTLNGTDRDFLIPFEYLARKFVQVTLVGVDRKVLTLNIDYRFTQRTIITTTKGWGPADGYQLIEIRRYTSATERLVDFSDGSILRAYDLNTAQVQSLHIAEEGRDIATDTIGVNNDGDLDARGRKIVNLADGVNDFDAVNLRQQRQWAGSALNQADRSKNEADRATAQANASAGSASNAATSAGSAATSASNAAGSNAAAQAQADRSKNEADRATAQANAATSNGATQVELARQQADRSKNEADRATTQANASTASAAASEASRQAALTQANRATAEADRAKTEADKLANVNALAGAIETVTGLDVRWKGYHEFKQMVQVLGGPSFMPQFRMFHENGQSRAIINDGSNILFHDMNTQRNLAVLDASGGFVVGGALYEGSAANRVWTRTTLPENSLLKGTGTINSKGNYNTVSGVPYQNLTPANQVYNGAFEIRENGLVCMGGPSPGHEYNAPGLTFHWGSAIVKKLFMTTDGHLNWGAHDDSRARLGADGNLYGPVWGGWLSTHLANRFGGKQNPHHFQAGRVGIGAPGGGYRQFRVNFHAPMGSPTVQITIYRPALHVAVIGRGESWVDGIDENGFTCWVHCEAGAQWDAYIDWMASPAVNVSGGGG
Physico‐chemical
properties
protein length:618 AA
molecular weight: 65989,01860 Da
isoelectric point:6,40782
aromaticity:0,07767
hydropathy:-0,41796

Domains

View on InterPro
Domain architecture
UPW35234.1
1 618 aa
ATT 1–131 · RBD 492–519 ·
ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped
Proteins with similar domain architecture

Taxonomy

Phage
Pseudomonas phage PCS5 [NCBI] · taxon 2936830
Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes
Host
Pseudomonas putida NBRC 14164 [NCBI] · taxon 1211579
Pseudomonadota Gammaproteobacteria Pseudomonadales Pseudomonadaceae Pseudomonas Pseudomonas putida

Coding sequence (CDS)

Genbank protein accession
UPW35234.1 [NCBI]
Genbank nucleotide accession
ON109291.1 [NCBI]
CDS location
range 34041 -> 35897
strand +
CDS
ATGGCTGACGCACCAAAGACTACGGTCACCTACACCCTTAACGGGACGGACAGGGACTTCTTGATCCCCTTCGAGTACCTCGCTCGGAAGTTCGTACAGGTGACCCTCGTGGGCGTGGACCGAAAAGTCCTGACCCTCAACATCGACTACCGGTTTACCCAAAGGACGATCATTACGACGACCAAGGGGTGGGGCCCTGCCGATGGCTACCAGTTGATTGAGATCCGCCGCTATACGTCCGCTACGGAGCGTCTGGTGGACTTCAGTGATGGTTCCATTCTGCGTGCATACGACCTCAACACCGCACAGGTCCAGTCCCTTCACATCGCTGAAGAAGGCCGGGACATCGCCACTGATACCATCGGGGTGAACAATGATGGCGACCTTGATGCCCGTGGCCGCAAGATCGTCAACTTGGCAGATGGGGTCAATGACTTCGATGCTGTCAACCTTCGCCAGCAACGGCAATGGGCCGGGTCCGCACTGAACCAAGCAGACCGCTCAAAGAACGAAGCTGACCGGGCAACAGCTCAGGCTAACGCATCCGCTGGTTCCGCAAGCAATGCAGCGACCTCGGCAGGTTCGGCTGCTACCTCGGCTTCCAATGCTGCTGGGTCCAATGCTGCTGCGCAGGCTCAGGCAGACCGCTCAAAGAACGAAGCTGACCGGGCAACAGCTCAGGCCAACGCCGCCACCTCCAACGGTGCTACTCAGGTCGAACTGGCTCGCCAACAGGCTGACCGATCAAAGAACGAAGCTGACCGAGCAACCACGCAGGCAAACGCATCTACTGCTTCGGCCGCTGCCTCTGAGGCGTCCCGTCAGGCAGCGCTTACGCAGGCCAACAGGGCCACAGCAGAAGCTGACAGGGCCAAGACGGAAGCCGATAAGCTGGCCAACGTGAATGCCCTTGCGGGTGCCATAGAGACCGTTACCGGCCTCGATGTGCGCTGGAAGGGCTACCACGAGTTCAAGCAGATGGTCCAAGTGCTGGGCGGCCCGTCCTTCATGCCACAGTTCCGAATGTTCCATGAGAACGGGCAGTCCCGTGCGATCATCAACGATGGCTCGAACATCCTGTTCCACGACATGAACACCCAGCGGAACCTTGCTGTACTTGATGCGTCTGGCGGCTTTGTCGTTGGAGGTGCCCTTTACGAAGGCAGCGCGGCAAACCGAGTGTGGACCCGAACGACCCTACCTGAGAACAGCCTCCTAAAGGGGACCGGCACGATCAACAGCAAGGGCAACTACAACACCGTTTCAGGCGTTCCGTATCAGAACCTGACTCCGGCTAATCAGGTCTATAACGGGGCCTTTGAGATTCGTGAGAATGGGCTGGTATGCATGGGTGGTCCGTCGCCCGGCCACGAGTACAACGCTCCCGGCTTGACCTTCCACTGGGGCTCAGCAATCGTAAAGAAACTCTTCATGACAACTGATGGGCATCTTAACTGGGGTGCGCATGACGACAGTAGGGCACGGCTGGGCGCAGACGGAAACCTCTATGGGCCTGTATGGGGCGGCTGGCTGTCTACCCACCTTGCCAACAGGTTCGGCGGGAAGCAGAACCCTCACCACTTCCAAGCTGGCCGGGTGGGGATTGGTGCTCCGGGTGGCGGATACCGTCAATTCCGCGTGAACTTCCACGCACCTATGGGAAGCCCTACAGTACAAATCACGATCTACCGGCCAGCTCTCCATGTGGCTGTAATTGGCCGTGGTGAGTCGTGGGTGGACGGTATTGACGAAAATGGCTTCACCTGTTGGGTCCACTGCGAAGCTGGTGCCCAATGGGATGCCTACATTGACTGGATGGCCAGCCCTGCCGTGAACGTATCGGGCGGGGGAGGCTAA

Genome Context

Tertiary structure

UPW35234.1
ESMFold structure
Source ESMFold
pLDDT 70.8
Oligomeric state monomer
Download structure

Literature

Title Authors Date PMID Source
Isolation and Characterization of Pseudomonas bacteriophages Johno,D., Masuda,Y., Honjoh,K.-I. and Miyamoto,T. 2022-11-12 — GenBank