Protein

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Genbank accession
WDS61933.1 [GenBank]
Protein name
Ig-like domain-containing protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,92
Protein sequence
MLPIPLLKLGRHFLDKRGGVKELAVLSYPIDNSDGTSTTVAYVNSLAILFDNGQLNITGYNRFGECRTGDLDTINYPNEAAWNVDHVWRADRAFVIRTFDNQFFYIGCTAGLIGSDAAGGNDVCVREWTPLPEQIVKGLHLDTHPERLVEVMGGINNTVWVMAEAEGTGILHLYGSGNNTYGSLHVDKNQHATPVKIGETSENPETGPWKNPSINCEVHDNSVIFGGPRGFWIAGYDFLRNNSRNTLVWPPAQITRDDLRGIPTDEEWKGFMCGPNGAVVVTQRMHRPDDQQLVNVFYGQDVWGDDTWRALNITYTHEVIMARGYGTSGIFFNNGTKQYRGFSRNLCNDIGAQSANNSPRANFIHYQALATAKYVEQRLPVSWTESVYFQGIHREGFFRNLYCC
Physico‐chemical
properties
protein length:404 AA
molecular weight: 45282,14410 Da
isoelectric point:5,73718
aromaticity:0,11386
hydropathy:-0,37351

Domains

Domains [InterPro]
DC_0065
STR
1–404
DC_0065
IPR009091
STR
28–217
IPR009091
IPR009091
STR
36–282
IPR009091
WDS61933.1
1 404
Architecture
STR
STR 1-404
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WDS61933.1
1 404
Domain Start End Length (AA) Confidence
N-terminal 1 206 206 0,0741
Central domain 207 393 188 0,1030
C-terminal 394 404 10 0,8466
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-206
Central
207-393
C-terminal
394-404

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage YP-6
[NCBI] 		3020453 Uroviricota > Caudoviricetes > Vequintavirinae > Vequintavirus YP6 >
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WDS61933.1 [NCBI]
Genbank nucleotide accession
OQ376695 [NCBI]
CDS location
range 66195 -> 67409
strand -
CDS
ATGCTTCCAATCCCTTTGCTAAAACTTGGTCGTCATTTCCTCGATAAGAGGGGTGGAGTTAAGGAACTTGCTGTTCTGTCATACCCAATAGACAACAGTGACGGTACAAGCACTACAGTAGCCTATGTAAATAGCTTAGCTATACTTTTTGACAATGGTCAGCTTAATATCACAGGGTACAACAGGTTCGGGGAGTGTAGGACTGGGGATCTTGACACGATAAACTACCCTAATGAGGCTGCCTGGAACGTTGATCATGTGTGGAGAGCAGACCGTGCGTTTGTGATCCGAACTTTTGATAATCAGTTTTTCTACATCGGCTGTACTGCAGGGCTTATTGGGTCTGATGCTGCAGGCGGTAATGATGTTTGTGTAAGGGAGTGGACACCTCTTCCTGAACAAATCGTTAAAGGATTGCACCTTGACACCCACCCAGAGCGCCTTGTTGAGGTGATGGGTGGTATTAACAACACCGTCTGGGTTATGGCAGAGGCAGAAGGCACTGGCATTTTACACTTGTACGGATCTGGTAACAACACCTACGGGTCTTTGCATGTGGATAAAAACCAGCATGCAACCCCTGTAAAGATTGGTGAAACATCGGAAAATCCTGAAACAGGTCCTTGGAAAAACCCAAGCATTAACTGTGAGGTGCATGATAACTCTGTTATTTTCGGTGGTCCTAGAGGTTTCTGGATTGCTGGATATGACTTTCTGAGAAACAATAGTAGAAACACTCTCGTTTGGCCCCCCGCTCAGATTACCCGTGACGATTTGAGGGGCATTCCTACAGATGAGGAGTGGAAAGGGTTCATGTGCGGTCCGAACGGGGCAGTGGTTGTAACACAAAGAATGCACAGACCTGATGACCAGCAACTTGTTAACGTATTCTACGGGCAAGATGTTTGGGGAGATGATACATGGCGTGCCTTGAATATCACCTACACCCATGAGGTAATAATGGCTCGTGGGTACGGCACAAGTGGCATTTTCTTCAACAATGGTACTAAGCAGTACCGTGGATTCTCTCGCAACCTTTGCAATGATATTGGCGCACAATCTGCAAACAATAGCCCTAGGGCCAATTTTATCCACTATCAAGCTCTTGCCACAGCCAAATACGTTGAGCAACGCCTCCCAGTTAGCTGGACAGAAAGTGTTTATTTCCAAGGCATTCACAGAGAAGGTTTTTTTAGGAACCTTTACTGTTGTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
c172dfbed4b4cd8587f0f7a03379785148c0df5fb204fc872ebe087eb63164cd
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6545
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50