Phage RBP Database

Genbank accession

XAO53149.1 [GenBank]

Protein name

hypothetical protein

RBP type

TF

Evidence RBPdetect

Probability 0,90

Seq2Symm

C2 confidence 0,240

C2	0,240
C1	0,142
I	0,003

Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).

Protein sequence

MAGAITTDNSATSYKSDGTPIYDNATGKSARYAKKDGVYFHIKDDLRLLLYLTANTDIDIDSSMSVTVQPMQSGETITDNYLRSPRIATITGVVVSTVEGTILTQTYNKNAEAFTAIAERWRDQKRILTLVCPHKQRLQNCVITKLSMKKDSSIANGLKIVATFQEVILKTNIGKTSISASGKRASKAGTAAKKQVGNTATTTGSSPSACQGLKTAYDNGLEKLNSTQKRLLANCIDNKSFGVKGTYSKTDDTAVSDYYKRHAGNPNSEKGVGTR

Physico‐chemical properties

protein length:	275 AA
molecular weight:	29685,18920 Da
isoelectric point:	9,55829
aromaticity:	0,05818
hydropathy:	-0,47164

Domain architecture

XAO53149.1

1 275 aa

ATT 56–170 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

IPR048494
ATT

IPR048494

IPR048494
ATT

IPR048494

XAO53149.1

1275 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_0819
ATT

DC_0819 DC_0796

XAO53149.1

1275 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR048494	ATT	DC_0432	56	169	InterPro cluster	Dit-like phage tail protein, N-terminal domain	Central	Medium	Text match	416 proteins / 416 hits
IPR048494	ATT	DC_0432	56	170	InterPro cluster	Dit-like phage tail protein, N-terminal domain	Central	Medium	Text match	416 proteins / 416 hits

Proteins with similar domain architecture

Phage

Erwinia phage vEam_S_24 [NCBI] · taxon 3138196

Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes

Host

Erwinia amylovora [NCBI] · taxon 552

cellular organisms Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales

Genbank protein accession

XAO53149.1 [NCBI]

Genbank nucleotide accession

PP079187 [NCBI]

CDS location

range 23081 -> 23908
strand +

CDS

ATGGCTGGTGCTATCACTACAGATAATTCGGCAACGTCTTATAAGTCAGATGGCACACCTATCTATGATAACGCTACAGGTAAATCGGCTCGTTATGCGAAGAAGGATGGGGTCTATTTTCATATTAAAGATGACCTCAGACTTCTCCTTTACCTTACAGCTAACACAGATATTGATATTGACAGTTCGATGAGCGTTACAGTTCAGCCTATGCAGTCAGGTGAGACAATCACAGATAACTATCTGAGAAGTCCTCGAATTGCCACTATCACAGGTGTTGTCGTTTCAACGGTTGAAGGTACAATTCTGACTCAGACCTACAACAAAAATGCTGAAGCCTTTACAGCGATTGCTGAACGCTGGAGAGACCAGAAAAGAATCTTAACACTGGTTTGTCCTCATAAGCAAAGACTCCAAAACTGTGTAATCACCAAACTCAGCATGAAGAAGGACTCTTCTATTGCCAACGGTTTGAAGATTGTTGCAACTTTCCAAGAAGTCATCTTGAAGACCAACATTGGCAAGACATCAATCAGTGCTTCTGGTAAGAGGGCTTCCAAGGCTGGTACAGCAGCTAAGAAACAGGTTGGTAACACAGCAACCACAACGGGTTCAAGCCCAAGTGCTTGTCAGGGTCTGAAGACTGCGTATGACAATGGACTTGAAAAACTCAATTCAACTCAGAAGAGATTACTGGCAAACTGTATCGACAACAAGTCATTCGGTGTGAAAGGGACTTACTCGAAGACTGATGATACGGCTGTATCTGACTATTACAAACGTCATGCTGGAAATCCAAACTCTGAAAAAGGTGTTGGAACAAGATAA

Protein

Domains

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)