Phage RBP Database

Genbank accession

AEY69698.1 [GenBank]

Protein name

putative carbohydrate binding protein

RBP type

TF

Evidence GenBank

Probability 1,00

TSP

Evidence DepoScope

Probability 1,00

TSP

Evidence RBPdetect

Probability 0,91

TSP

Evidence RBPdetect2

Probability 0,99

Seq2Symm

C3 confidence 1,000

C3	1,000
D3	0,016
C1	0,004

Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).

Protein sequence

MTAKPGNARFALAASADFNGSIDAVSVSQVLSLAAFRSADGAWWEIAEPVVNVLAFGARPDNATNAGPSFQEALDYIAAVGYNRELYIPPVGTYLFTSGVTIGDGSAQRLALTIRGGGSGTRLVHSADKALFTILGDCTEFIARDFEVWAGVDQNDPTKGVFYIPNGLSRSSFYDIQGQQNGPNTRLSSFFYSEAGVPMDEITFHNIVEVHNHTGFRLGAGSSVWFVGGRSVGNYPATVCTGLDIVGGMGGVFVWGTDFIINHYNARVRNLTGSTNREIFFSQSCFDGGFIGLYIEDESYVNIVGCWAASADQACIECSFSGNGGVLNISGGTVYNAGVVSLNAGDKIGVIFGGLGRIDMSGVTVRENRNRGIYLTNPARTQFSNIRANNFFGNGTTGTNPCDIFVSGAAVVENNTVTNGIIRGSGDTIIRNNVGDAATITTPTIPASGTPITNQTGRTVEVFISGGTVSQVTKRGVPVFSSSNVSLLLQPGDAIAVTYTAAPTWAWVLP

Physico‐chemical properties

protein length:	510 AA
molecular weight:	53695,29540 Da
isoelectric point:	5,04033
aromaticity:	0,10196
hydropathy:	0,08784

Domain architecture

AEY69698.1

1 510 aa

STR 41–418 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

IPR011050
STR

IPR011050

IPR011050
STR

IPR011050

IPR012334
STR

IPR012334

AEY69698.1

1510 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_1620
RBD

DC_1620

AEY69698.1

1510 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR011050	STR	IPR011050	41	328	Merged direct domain	Pectin lyase fold/virulence factor	Central	Low	Positional only	572 proteins / 572 hits
IPR011050	STR	IPR011050	50	328	Merged direct domain	Pectin lyase fold/virulence factor	Central	Low	Positional only	572 proteins / 572 hits
IPR012334	STR	IPR012334	51	418	Merged direct domain	Pectin lyase fold	Central	Low	Positional only	867 proteins / 867 hits

Proteins with similar domain architecture

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout

AEY69698.1

1 510 aa

Domain	Start	End	Length (AA)	Confidence
N-terminal	1	65	65	0,9822
Central domain	66	435	371	0,9967
C-terminal	436	510	74	0,9833

N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Phage

Brucella phage Tb [NCBI] · taxon 1133292

Uroviricota Caudoviricetes Perisivirus

Host

Brucella abortus S19 [NCBI] · taxon 430066

Pseudomonadota Alphaproteobacteria Hyphomicrobiales Brucellaceae Brucella Brucella abortus

Host

Brucella abortus 544 [NCBI] · taxon 1169205

Bacteria Proteobacteria Alphaproteobacteria Rhizobiales Brucellaceae Brucella

Genbank protein accession

AEY69698.1 [NCBI]

Genbank nucleotide accession

JN939331 [NCBI]

CDS location

range 23608 -> 25140
strand +

CDS

ATGACGGCAAAACCAGGCAATGCGAGGTTTGCCCTTGCGGCATCGGCTGATTTTAACGGGAGCATAGATGCTGTTTCGGTGTCCCAGGTTTTGAGCCTCGCAGCATTCAGATCAGCCGATGGGGCTTGGTGGGAAATTGCTGAACCAGTTGTCAATGTATTGGCATTTGGTGCAAGGCCCGACAATGCGACAAACGCTGGGCCGTCGTTTCAGGAAGCCCTCGATTACATTGCAGCCGTTGGGTACAACCGTGAACTTTATATACCGCCTGTTGGCACATATTTGTTCACATCAGGTGTCACGATTGGTGACGGGTCCGCGCAGAGGCTAGCCCTCACTATTCGCGGAGGTGGCTCCGGAACTCGGTTGGTTCACAGCGCTGATAAAGCATTGTTCACAATACTAGGTGATTGCACAGAGTTTATAGCGCGTGATTTTGAGGTGTGGGCGGGGGTCGACCAAAATGATCCGACTAAGGGCGTCTTCTACATACCTAATGGCCTATCACGTTCATCGTTTTACGACATTCAGGGGCAGCAAAACGGGCCGAATACTCGATTGTCGTCATTCTTCTATAGTGAAGCTGGCGTACCTATGGATGAAATTACATTCCACAATATTGTGGAGGTTCATAATCACACTGGTTTTCGGCTAGGTGCCGGGTCGTCAGTGTGGTTCGTTGGGGGGAGGTCAGTCGGCAACTATCCTGCCACAGTATGCACAGGTCTTGATATAGTCGGCGGAATGGGTGGGGTATTTGTTTGGGGAACAGACTTCATTATCAACCATTATAACGCTCGGGTAAGAAACCTAACTGGTTCCACGAACCGCGAAATTTTCTTTTCTCAATCATGCTTTGATGGTGGATTTATCGGTCTATACATCGAAGACGAGAGCTATGTGAATATTGTTGGATGTTGGGCGGCGTCTGCCGACCAAGCTTGCATTGAATGCTCTTTCTCAGGAAACGGCGGTGTCTTGAACATCTCCGGCGGTACAGTCTATAACGCCGGAGTTGTATCACTTAATGCTGGAGACAAAATCGGCGTTATTTTCGGCGGCTTGGGACGTATTGATATGTCTGGGGTTACAGTACGTGAAAACCGCAACCGAGGGATATACTTGACAAATCCAGCAAGGACGCAGTTCTCTAACATTCGGGCGAATAATTTCTTTGGTAATGGTACAACAGGTACAAACCCATGCGATATATTCGTCAGTGGGGCAGCGGTTGTCGAAAATAACACTGTTACCAACGGGATTATACGTGGTTCGGGCGATACTATAATTAGAAATAATGTCGGGGATGCTGCGACTATAACAACACCGACTATACCCGCAAGCGGCACACCGATAACAAATCAAACGGGCCGTACCGTTGAAGTTTTCATATCTGGGGGGACGGTTTCGCAGGTAACTAAACGGGGCGTTCCTGTATTTTCTTCGTCAAACGTTAGTCTACTACTACAACCCGGCGATGCCATAGCGGTTACGTACACAGCGGCCCCAACATGGGCATGGGTGCTGCCTTAG

Protein

Domains

Tail Spike Domain Segmentation

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)