Protein

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Genbank accession
WGH28220.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
Protein sequence
MTVSANSRRREYQGNGVTQVFNGPMAYARAHVYAFLVKGKTMTLVPNASFDVEKLGYESGTRVTMHTPPAADEMLLLLRTMPYTQETDITNQGAFHAETIEKGFDALEMQIQQLVDGTIQLVFEDGEFVWDAKGSRIIRVGDPTGDQDAVNLRTLYLVIEQIQNGGGSVGVSPKYWEITGDGEDTDFELPGSDVSDLLFYDVVVEGLSKEPYDEYTIVAASDGSDFAVRFPAPLPNGAEGFVILRGYAKPFTGNTPVQTLRIPIIDVDGTTYTVDKSSEFALLRTTNVNPCLLTLRANQGDLFDMGDGSYFSVCQRGDGQARIVADTGVTLVLPEGFVPYTRAPGSIISAVCEYAEGDTWVLSGDLAQG
Physico‐chemical
properties
protein length:369 AA
molecular weight: 40112,45310 Da
isoelectric point:4,35031
aromaticity:0,09485
hydropathy:-0,13604

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WGH28220.1
1 369
Domain Start End Length (AA) Confidence
N-terminal 1 364 364 0,8972
Central domain 365 364 1 0,0347
C-terminal 365 369 4 0,9461
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-364
Central
365-364
C-terminal
365-369

Taxonomy

  Name Taxonomy ID Lineage
Phage Xanthomonas phage 10KY502B
[NCBI] 		3038237 No lineage information
Host Xanthomonas citri
[NCBI] 		346 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Lysobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WGH28220.1 [NCBI]
Genbank nucleotide accession
OQ622092.1 [NCBI]
CDS location
range 4218 -> 5327
strand +
CDS
ATGACCGTCTCCGCCAACAGCCGCCGCCGCGAGTACCAGGGCAACGGCGTCACCCAGGTGTTCAATGGGCCGATGGCCTATGCGCGCGCGCACGTCTACGCCTTCCTGGTGAAGGGGAAGACGATGACGCTGGTGCCCAATGCCAGCTTCGACGTGGAAAAGCTGGGGTACGAATCGGGCACGCGCGTCACCATGCACACGCCGCCGGCCGCTGACGAAATGCTGCTGCTGCTGCGCACGATGCCGTACACCCAGGAAACCGACATCACGAACCAGGGCGCGTTCCACGCGGAAACCATCGAAAAGGGGTTTGATGCGCTGGAAATGCAGATCCAGCAGCTGGTCGATGGCACGATCCAGCTGGTGTTCGAAGATGGCGAATTCGTGTGGGATGCGAAGGGCAGTCGCATCATCCGCGTGGGCGACCCGACTGGCGATCAGGACGCTGTGAACCTGCGCACCCTGTACCTGGTCATCGAACAGATCCAGAACGGCGGCGGCTCGGTCGGCGTCAGTCCGAAATACTGGGAAATCACGGGCGACGGCGAGGATACCGACTTCGAACTGCCCGGCTCCGACGTGTCGGATTTGCTCTTCTACGACGTGGTGGTGGAAGGCCTGTCGAAGGAGCCTTACGACGAATACACCATCGTTGCGGCATCGGATGGATCCGACTTCGCGGTGCGGTTCCCGGCGCCGCTGCCGAACGGCGCCGAAGGCTTCGTGATCCTGCGCGGCTATGCCAAGCCGTTCACCGGTAACACCCCGGTGCAGACGCTGCGCATCCCGATCATCGACGTGGATGGCACCACGTACACGGTGGACAAGTCCAGCGAATTCGCACTGCTGCGCACCACGAACGTCAACCCCTGCCTGCTCACGCTGCGCGCGAATCAGGGCGATCTGTTCGACATGGGGGACGGCAGCTATTTCAGCGTGTGCCAGCGTGGCGATGGCCAGGCCCGGATCGTCGCCGACACCGGGGTGACGTTGGTCCTGCCCGAAGGATTTGTGCCCTACACGCGCGCGCCAGGTTCGATTATCTCGGCCGTCTGCGAGTATGCGGAGGGTGACACCTGGGTGCTGTCCGGCGACCTGGCGCAGGGCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
e9783dcd76a6796775e80519a41e46319fcb2439cf59cb783588361e91f0fe6e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8440
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50