Protein

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Genbank accession
QWY13698.1 [GenBank]
Protein name
hinge connector of long tail fiber proximal connector
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,79
Protein sequence
MSNLMAGFGPDFVETQILSETNSVTYRITAKATHPNAVPNQYEFTLNQKAVGTPPSVGINVWRINNAVVDPIKTFTLSNDNSATANKAFVEYMDAQPSGLYLIMTNGEYKTSQIVDDWFAKNRSVMWQGADFAQRFPNSAYVALYGASKSRILIESFYANDGVLKEDSRASIDLVYDNVGDVGRTGVPFRSVEDTEEYNSTNGSEYKVYPVANPVISKLADYGMAPGLAMMIAGDFYASKALLDAGSTTRVTVRWFTGTAQTSSSVIEVPANKPDEWLRFEQFYTIPSGCDGFNVAVSRYPKPATDSLSAIRNFVMVQVSAAEADQNFAAQFGVNGIRMNNMIDGGTPYIFELPNTKVYPGGDYSASEFREVDA
Physico‐chemical
properties
protein length:374 AA
molecular weight: 40988,28110 Da
isoelectric point:4,68304
aromaticity:0,11765
hydropathy:-0,23316

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QWY13698.1
1 374
Domain Start End Length (AA) Confidence
N-terminal 1 46 46 0,4243
Central domain 47 245 200 0,5603
C-terminal 246 374 128 0,4814
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-46
Central
47-245
C-terminal
246-374

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage vB_KpnM_VAC13
[NCBI] 		2849068 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QWY13698.1 [NCBI]
Genbank nucleotide accession
MZ322895 [NCBI]
CDS location
range 72274 -> 73398
strand +
CDS
ATGTCAAACTTAATGGCGGGGTTCGGCCCCGATTTTGTAGAAACGCAAATTCTATCGGAAACAAACAGCGTAACTTACAGAATAACCGCAAAGGCAACACATCCCAATGCGGTTCCTAATCAGTATGAGTTTACACTAAATCAAAAGGCGGTAGGGACACCGCCTAGTGTTGGGATCAACGTATGGAGAATTAACAATGCTGTAGTTGATCCAATTAAAACCTTCACATTATCGAATGATAATTCAGCAACTGCAAACAAAGCGTTTGTTGAATATATGGATGCTCAACCTTCTGGGCTGTATTTGATAATGACTAACGGTGAATACAAAACAAGCCAAATCGTTGATGATTGGTTTGCTAAAAACAGATCCGTTATGTGGCAAGGCGCTGATTTCGCTCAGAGATTCCCAAATTCTGCATATGTTGCATTGTATGGGGCTTCAAAATCTCGTATACTGATTGAATCGTTTTACGCGAACGATGGAGTTTTAAAAGAAGATTCACGCGCATCAATCGATCTTGTCTATGATAACGTTGGTGATGTTGGGCGAACTGGTGTACCTTTCCGATCTGTTGAAGATACGGAAGAATACAATTCAACCAATGGATCTGAATATAAAGTATATCCTGTTGCAAACCCAGTGATCTCTAAACTGGCTGATTATGGTATGGCTCCTGGATTAGCTATGATGATTGCTGGTGATTTTTACGCCAGCAAAGCATTATTGGATGCTGGATCAACAACAAGGGTTACTGTTCGATGGTTTACGGGTACTGCTCAAACTTCATCATCGGTGATTGAAGTTCCTGCAAATAAACCTGATGAGTGGTTACGATTTGAACAGTTCTATACGATCCCTAGTGGTTGTGATGGATTTAACGTTGCTGTATCTCGTTATCCTAAACCCGCTACGGATAGTTTATCTGCGATCCGTAACTTTGTGATGGTTCAGGTATCTGCTGCCGAAGCTGATCAAAACTTTGCTGCACAGTTTGGGGTTAACGGTATCAGAATGAACAACATGATCGATGGCGGAACACCGTATATATTTGAATTGCCTAATACTAAGGTTTATCCAGGTGGTGATTATTCTGCTTCCGAATTCCGTGAAGTTGATGCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
9e0779422fb2515c761ddc04f38b9a818b4a626f125b5477b6694476f42c8365
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6278
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Enhanced antibacterial activity of repurposed mitomycin C and imipenem in combination with the lytic phage vB_KpnM-VAC13 against clinical isolates of Klebsiella pneumoniae Pacios,O., Fernandez-Garcia,L., Bleriot,I., Blasco,L., Ambroa,A., Lopez,M., Fernandez-Cuenca,F., Oteo,J., Pascual,A., Martinez-Martinez,L., Domingo-Calap,P., Bou,G. and Tomas,M. — — GenBank