Protein

View in Explore
Genbank accession
QBX24778.1 [GenBank]
Protein name
tail fiber protein and host specificity
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,63
TF
Evidence RBPdetect2
Probability 0,82
Protein sequence
MLLTIHDAHLKKVAFIDNEKQDTLSFYDDTWTRNLQTGSSTYEFSISKKTLVSDTVLNRTYSYLNERAFVSFEYKGETFLFNVMTVEEDEKKIKCYCENLNLELINEYSNPFKAGRAMSFVEYCNAMDLLNMTKLSIGINEISDYKRTLEWEGQDTKLARLISLANKFDAEIDFKTYLNDDSTIKQFLVNVYHENDGINYHGVGRDRKDITLVYGKNLKSIKRKVDKTNIFNMIVPTAQSEENSDQKLTIGSLPNWELKNDKGIVEFYKRGDAIYAPISAQLYPSTFTPETQSDQWIRRDMDFNVKSIQQLETEGLKQLKASAYPELTYEFDGYIDADIGDTVQLSDDGFANTLLIEARIFEQKLSFSTERNWKTTLGNFRALQNKLSNDIQNELERLIENAKPYDIRLSTDNGTTFKNNEGESLVKATLWKGGKVVNQDVSWRWALDGVVTVGMQYLVKAKNIKDTAVLTVAAYIDNNEVATTEITLTNVNDGADGAKGDKGDKGDKGADSCAHTAYANITRLCNESSSFTLSAKSIVRYGRDDKWIYKTLEAGTYTASNSFFGGDPYNGLGKYCELVSDFSLTDSTGRSWLGIYSDNNVDTVANPSYFTWQLTKGERGPQGIQGLQGPKGDQGIQGPKGTDGKTQYTHIAYADNATGGGFSQTDQTKAYIGMYVDFTATDSNDPTKYRWSKWHGDKGATGDQGIQGPKGDDGRTPYLHIAYANSADGRTDFSTSNTDNKRYLGTYTDYTQADSTDPTKYKWVDMVGSVEVGIKNLILKSNDFANPHKQNGANTTVTSTDDYFVIKSTGYTANAWGGMSWNMSISEVTAGEEFSILMPVYIDSSIDLDSDVYFQLKNHPKNLTAYSYLIPKTQKDEWFNVAITFKTTKDVVLDTYPFYVFLVKNGLVRIKPPTLVRGNVIPSDYVSAPEDTQEQIDSKADSVLTQEQLNALAEKNRNMEAELAAKASLETIEQWKQAYDAYVAQNDRDKSNHEQNLVTLSTRLAEWVKDWEDKKVQWSFLDTNMDFGEEGLRLGKKGSPTSIMISNDRISFFSGGSEVASMSNGTLTIDNGIFAKSLQIGHYREEVYEGDKNINVIRWVD
Physico‐chemical
properties
protein length:1101 AA
molecular weight: 123816,15100 Da
isoelectric point:4,98156
aromaticity:0,10808
hydropathy:-0,58529

Domains

Domains [InterPro]
DC_0109
STR
1–1101
DC_0109
IPR007119
Unmapped
59–375
IPR007119 IPR050149 Coil
IPR010572
ENZ
146–381
IPR010572 G3DSA:1.20.5.320
QBX24778.1
1 1101
Architecture
STR
STR 1-1101
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Streptococcus phage Javan206
[NCBI] 		2548046 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Streptococcus equinus JB1
[NCBI] 		1294274 Bacillota > Bacilli > Lactobacillales > Streptococcaceae > Streptococcus > Streptococcus equinus

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QBX24778.1 [NCBI]
Genbank nucleotide accession
MK448874.1 [NCBI]
CDS location
range 29797 -> 33102
strand +
CDS
ATGCTTCTAACAATACACGATGCACATTTGAAGAAAGTAGCGTTTATTGACAACGAGAAGCAAGACACATTGAGCTTTTACGACGATACTTGGACACGTAATTTACAAACAGGTTCGTCAACGTATGAGTTTAGCATCTCTAAGAAGACGCTTGTTTCAGATACAGTCTTAAACAGAACATACAGCTATTTGAATGAACGTGCCTTTGTGTCGTTTGAATATAAAGGCGAGACGTTTCTGTTTAATGTGATGACTGTTGAAGAAGATGAAAAGAAAATCAAATGTTATTGTGAGAATTTAAACCTAGAGCTTATTAACGAATATTCAAATCCGTTTAAAGCAGGCAGAGCTATGTCGTTTGTTGAGTACTGTAATGCTATGGATTTACTAAATATGACTAAATTATCCATCGGTATTAACGAGATTTCAGATTATAAGCGCACTTTGGAATGGGAAGGGCAAGACACCAAACTTGCCCGCTTAATCTCATTAGCAAACAAATTTGATGCTGAAATTGATTTTAAAACTTATCTCAACGATGACAGCACCATAAAACAGTTTTTAGTCAATGTTTATCACGAAAATGACGGCATTAATTATCACGGCGTTGGACGTGATAGAAAAGACATTACGCTAGTTTATGGGAAGAACCTTAAGTCAATCAAGCGCAAGGTTGACAAGACAAATATCTTTAATATGATCGTGCCTACCGCTCAAAGTGAAGAGAACAGCGATCAAAAATTGACTATCGGGAGTTTGCCGAACTGGGAGCTAAAGAATGATAAAGGCATTGTTGAATTTTACAAACGAGGCGATGCCATTTACGCTCCTATTTCAGCTCAGCTTTATCCGTCAACGTTCACACCAGAAACGCAATCAGACCAATGGATAAGGCGTGATATGGACTTTAACGTCAAAAGCATACAACAGCTTGAGACAGAAGGATTAAAGCAGTTGAAAGCATCAGCTTATCCTGAGCTAACATATGAATTTGACGGCTACATTGATGCTGATATCGGAGACACGGTGCAGCTATCAGACGATGGCTTTGCTAACACTTTGTTGATTGAAGCACGTATTTTTGAGCAGAAGTTAAGTTTTTCAACAGAAAGAAACTGGAAAACGACTCTTGGTAATTTCAGAGCTTTACAAAACAAGCTATCTAATGACATTCAAAACGAGTTAGAGCGCTTGATAGAGAATGCGAAACCGTATGACATACGACTTTCAACGGATAATGGAACAACGTTTAAAAACAACGAAGGTGAAAGTTTAGTAAAAGCCACATTATGGAAAGGTGGCAAAGTTGTCAATCAGGACGTCTCTTGGCGCTGGGCTTTGGACGGCGTGGTTACAGTCGGAATGCAGTACTTAGTCAAAGCCAAAAATATCAAAGACACAGCTGTTTTAACTGTTGCAGCCTACATTGACAACAACGAAGTAGCGACGACCGAAATCACGTTGACGAACGTCAACGATGGCGCTGACGGTGCTAAAGGTGATAAAGGTGACAAGGGGGATAAAGGGGCTGATAGCTGCGCACACACAGCTTACGCAAATATCACAAGACTCTGTAATGAAAGTAGTAGTTTCACGCTTTCAGCAAAATCAATTGTTCGTTATGGACGCGATGACAAATGGATTTACAAAACGCTTGAAGCTGGTACGTATACAGCTAGTAATTCTTTTTTCGGTGGTGACCCTTACAACGGACTGGGCAAGTATTGTGAGCTTGTTTCTGACTTCTCTTTGACAGACAGTACAGGTCGCAGTTGGCTAGGTATATACAGTGACAATAATGTAGACACTGTTGCTAATCCGAGCTATTTCACTTGGCAGTTAACCAAAGGGGAACGTGGTCCGCAAGGTATCCAAGGCTTGCAAGGTCCCAAAGGTGACCAAGGTATCCAAGGACCAAAGGGCACTGATGGTAAGACACAGTACACGCATATCGCTTATGCTGATAATGCCACGGGCGGTGGATTTAGTCAAACAGACCAAACCAAAGCTTATATTGGTATGTACGTTGACTTTACTGCAACAGACAGCAACGACCCGACTAAATATCGTTGGAGCAAGTGGCACGGAGACAAAGGTGCAACAGGCGACCAAGGTATTCAAGGACCAAAGGGTGATGATGGCAGAACACCTTACTTACACATCGCCTACGCCAACAGTGCAGATGGACGTACTGATTTTAGCACGTCAAATACAGACAACAAGCGCTATTTAGGTACGTATACTGACTACACGCAAGCAGACAGCACAGACCCAACTAAATACAAGTGGGTTGATATGGTTGGAAGTGTTGAAGTTGGTATTAAAAATCTTATCTTAAAATCAAACGACTTCGCAAATCCACATAAGCAAAACGGTGCGAACACGACAGTAACATCAACCGATGATTACTTCGTTATTAAAAGCACAGGCTACACAGCGAATGCTTGGGGCGGTATGTCGTGGAATATGTCTATTTCAGAAGTGACCGCTGGCGAGGAATTCTCTATTTTGATGCCAGTATATATCGACAGTTCAATTGATTTGGATAGTGACGTATATTTTCAACTGAAAAATCACCCTAAAAATCTTACAGCATACAGTTACTTGATCCCAAAAACTCAAAAAGACGAATGGTTTAACGTGGCAATAACGTTTAAAACTACCAAAGATGTCGTTCTTGACACCTATCCATTCTATGTTTTTCTTGTCAAAAACGGTCTAGTACGCATTAAGCCACCTACGCTTGTTCGTGGAAATGTTATACCAAGCGATTATGTGTCAGCCCCAGAAGACACACAGGAGCAAATCGATAGTAAGGCAGACAGCGTGTTAACGCAAGAGCAGTTGAATGCGCTGGCGGAAAAGAATCGCAACATGGAAGCAGAACTTGCAGCGAAAGCAAGTCTTGAAACCATCGAGCAATGGAAACAAGCTTATGACGCTTATGTCGCTCAAAATGACCGAGACAAGAGCAATCACGAGCAAAACCTTGTCACACTCTCTACACGGTTGGCTGAATGGGTCAAGGACTGGGAAGACAAAAAGGTTCAATGGTCTTTCCTTGATACAAATATGGATTTTGGCGAAGAAGGGTTAAGGCTTGGTAAGAAAGGCAGCCCAACGTCAATCATGATTTCAAATGACCGTATTTCTTTCTTCTCTGGTGGTTCGGAAGTAGCTAGCATGTCAAACGGTACGTTAACTATCGATAACGGTATCTTTGCCAAAAGCTTGCAAATTGGACACTATCGCGAAGAAGTGTATGAAGGAGATAAAAATATAAATGTAATTCGCTGGGTTGACTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
6c99844b8503c32588df5e9cb49679372e80def446290aad0ba15423a99c07a6
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2975
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Prophages and satellite prophages are widespread among Streptococcus species and may play a role in pneumococcal pathogenesis Rezaei Javan,R., Ramos-Sevillano,E., Akter,A., Brown,J. and Brueggemann,A.B. 2018-12-20 — GenBank