Protein

View in Explore
Genbank accession
ALP46897.1 [GenBank]
Protein name
tail fiber
RBP type
TF
Evidence GenBank
Probability 1,00
Protein sequence
MEKIMELRNITRYHPEEKPYGEGIQYFRSEDGQDFYESLDKFTKKYKLCIHPETGVIYSVAEDVSRLYPVGFTIVEVDALPEGFGIEACWYYMDGEVLPVPVDYRQQVESERARLISLAEREISDKKMDLLLGLISEQDKEKLKIWRIYAKSLQAMDFSAITDKASYNAIEWPVSPEISS
Physico‐chemical
properties
protein length:180 AA
molecular weight: 20910,53560 Da
isoelectric point:4,74665
aromaticity:0,11667
hydropathy:-0,42167

Domains

Domains [InterPro]
IPR003458
66–177
IPR003458
ALP46897.1
1 180
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia coli
[NCBI] 		562 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ALP46897.1 [NCBI]
Genbank nucleotide accession
KU052037.1 [NCBI]
CDS location
range 47333 -> 47875
strand +
CDS
ATGGAGAAAATAATGGAGCTAAGAAACATTACGCGTTATCACCCTGAAGAGAAGCCTTATGGAGAAGGTATTCAGTATTTCCGCAGTGAAGACGGGCAGGATTTTTATGAGTCACTGGATAAGTTCACGAAGAAATACAAATTATGTATTCACCCTGAAACCGGGGTGATTTATTCAGTGGCGGAAGACGTATCCCGTCTTTATCCCGTGGGTTTTACCATCGTGGAAGTGGATGCGTTACCGGAAGGCTTTGGCATTGAAGCATGCTGGTATTATATGGACGGTGAAGTTCTTCCTGTGCCTGTTGACTACCGACAACAGGTGGAGTCGGAGAGAGCTCGTCTTATATCTCTTGCTGAACGGGAAATATCTGATAAGAAAATGGATTTACTGCTTGGGCTAATCAGCGAGCAGGATAAGGAAAAACTGAAAATCTGGCGTATTTACGCGAAATCGCTGCAGGCGATGGATTTCAGCGCCATTACTGATAAAGCCTCATATAACGCCATTGAGTGGCCCGTTTCTCCGGAAATCTCTTCCTGA

Tertiary structure

PDB ID
867e9e4c4eb0cb6fe2572707030e80bafd358fef0a2885704875f3d03ad87746
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8616
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The chromosomal nature of LT-II enterotoxins solved: a lambdoid prophage encodes both LT-II and one of two novel pertussis toxin-like toxin family members in type II enterotoxigenic Escherichia coli (ETEC) Jobling,M.G. 2016-01-10 — GenBank