Protein

View in Explore
Genbank accession
YP_010669710.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,87
TF
Evidence RBPdetect2
Probability 0,97
Protein sequence
MALQGISTGTTPNDGTGDSLLVGAVKVNDNFQEIYNALGNGTNLLTGNPGLTVGFITATGASFTGDVSIGGTLTYEDVTNIDSVGLITARDGISVLGAGITVTGVSTFYSSTTIGAASTFTDSGLSVGSAVTVTATGVNVTGIVTATTFEKIGGTSSQFLKADGSVDSSTYLTTALGNLVEDTTPQLGGDLDLNNRDITGTGDISIDTGNISLTNGYLQSNLGISTNSGSTTAQINVDSTGNQLIITVPGVGSTTLPLT
Physico‐chemical
properties
protein length:259 AA
molecular weight: 25754,93740 Da
isoelectric point:4,05003
aromaticity:0,04633
hydropathy:0,18764

Domains

View on InterPro
Domain architecture
YP_010669710.1
1 259 aa
ATT 4–43 · STR 44–60 ·
ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped
Proteins with similar domain architecture

Taxonomy

Phage
Synechococcus phage S-SCSM1 [NCBI] · taxon 2588487
Uroviricota Caudoviricetes Pantevenvirales Zhoulongquanvirus Zhoulongquanvirus esscess
Host
Synechococcus sp. WH 7803 [NCBI] · taxon 32051
Bacteria Cyanobacteria Oscillatoriophycideae Chroococcales Synechococcus

Coding sequence (CDS)

Genbank protein accession
YP_010669710.1 [NCBI]
Genbank nucleotide accession
NC_070962.1 [NCBI]
CDS location
range 21084 -> 21863
strand +
CDS
ATGGCACTACAAGGTATATCAACTGGAACTACACCAAATGACGGTACTGGAGATTCTCTCCTTGTAGGTGCCGTTAAGGTTAATGATAATTTTCAAGAAATTTATAATGCTCTTGGAAATGGTACAAATTTATTAACTGGAAATCCTGGTCTTACTGTTGGATTTATCACTGCCACTGGAGCATCTTTTACTGGAGATGTATCTATTGGTGGAACTCTTACATATGAAGATGTAACTAATATTGATTCTGTTGGATTGATTACTGCAAGAGATGGTATTTCAGTTCTTGGTGCGGGAATTACAGTAACTGGTGTTTCTACATTTTATAGTTCTACTACAATTGGTGCGGCAAGTACTTTCACCGATAGTGGTCTTTCTGTGGGTTCTGCGGTCACTGTAACTGCAACTGGAGTCAATGTAACGGGTATTGTTACTGCAACTACATTTGAAAAAATTGGTGGTACTTCATCACAGTTTCTAAAAGCAGATGGTTCTGTAGATAGTAGTACATATTTAACTACCGCATTGGGAAATCTTGTTGAAGATACGACACCGCAACTCGGTGGTGATTTAGATCTAAACAATAGGGATATCACTGGAACTGGTGATATTTCTATTGATACTGGAAATATATCTTTAACTAATGGTTATTTGCAGTCTAATTTGGGGATTAGCACTAATTCTGGATCAACCACTGCCCAAATTAATGTTGACTCGACTGGAAATCAGTTGATAATTACTGTGCCAGGTGTTGGTTCAACAACCCTACCATTAACCTAA

Genome Context

Tertiary structure

YP_010669710.1
ESMFold structure
Source ESMFold
pLDDT 69.9
Oligomeric state monomer
Download structure

Literature

Title Authors Date PMID Source
Genomic and proteomic characterization of cyanophage S-SCSM1 provides new insights into understanding the viral gene diversity and phage-host interactions Wang,Q., Xu,Y., Jiao,N. and Zhang,R. 2022-10-26 — GenBank