Phage RBP Database

Genbank accession

CAB4123098.1 [GenBank]

Protein name

Phage tail sheath C-terminal domain containing protein

RBP type

TSP

Evidence RBPdetect

Probability 0,64

Protein sequence

MPDLVSPGVSVTVTNESFYTSAPTGTVPLIVIATAQDKLQPGTNSVAQNTTKATAGELKLVTSQRDVLQMYGAPNFYSVGGTPQFDNELNEVGLFSLYEFLGIATNAYVIRADVDLAQLAPSSVEPTGSPTNGSYWLDTSQSTWGTFVSNGDQNPAFAWAAVAPMVITDAMLMENVVQGRATPKITSGSTNSIVGTSTLTINGVDISLNATMTLPDIANAINGNLSLQLLNITAQVFSHNETFSSSNNRVVPVYNLRLNSQDIATAIDLSSNTDTSTMTKLGLDINALNVAAPLTSMGSVGDLAVDTVSVSPDGTRKNRIWEKISVVTVDPVGGNTTKSWWFAVGTTPTTTLTNGTHTSNVFAGWDWLSSEPVVVVGGGGSTPTMNVSAIAATITIGNTIGGSTTLSVGPTNTTLASFVANINAQFSAHSINANADVYTSGINSQLRITNYDGTSIKLHDSFNPTGNINGIWTTVGIDTSQTYFGGVTATVATPTFIEGDQFTVDIGGGPQKITVLASPNHTIGNVVAQINTAVGVTIATQASNFLSLSRAGTYIKLQEIHGSPLTNAGIDVGVKYARSAFFKDYYNASSTTAFTVPSLPTELSAKSIWVNTTSQNRGASTQVKQYANGTWVTQNTVPNTGTIPWFKDTNTANLSFGARKNNSSLFMCYNLDNAAVSSDNAIPTEMTAELLRWDGSTWSTAGTKDSQTWNYVPSTTAPQGAPADGTLWYNTQLLADVMVGTGQQWKGYKNVYPGTDPNGIIISGSAPLTQSTGSALADYDLWLDSSATAYPVISRYVAGSRSWIQIDNTDHVTSAGIIFEDARSDAGSQYSYSTSTDVLAASDYVDSDAPDAELHPAGMLLFNTRYSTNNVKQWSANYFGAGNGTWVTASGNSASDFTPYMGHAAQRIMIVKAIQGALQASEEARAEAVYFNLLATPGYPECIDEMVTLNTDKKEIAFIVGDTPAHLAPTGTAIVNWASNTANAYDNGDAGLVTRNDYVGVWYPWALSTNLDGSYVFVPPSMMALRTIAFNDQVAYPWFAPAGFNRGLVTGVNSVGYLNTIGEYKPLTLNQGQRDVMYTHSINPIAYIPNRGLVVYGQKTLSPTTSAMDRINVARLINYLKYQLDNVAKVFLFEPNDKQTRDAVLTTFNGFFNNLVGLRAIYDFAVVCDETNNTPFRIDANQLWIDVAIKPEKAIEFIYIPIRLLNTGDPMPNGTR

Physico‐chemical properties

protein length:	1216 AA
molecular weight:	129871,15820 Da
isoelectric point:	4,69606
aromaticity:	0,09293
hydropathy:	-0,08528

Domain architecture

CAB4123098.1

1 1216 aa

STR 862–1058 · TAS 1105–1203 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

G3DSA:3.40.50.11780
STR

G3DSA:3.40.50.11780 IPR052042

IPR020287
TAS

IPR020287

CAB4123098.1

11216 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_2235
STR

DC_2235

CAB4123098.1

11216 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
G3DSA:3.40.50.11780	STR	G3DSA:3.40.50.11780	862	1058	Merged direct domain	G3DSA:3.40.50.11780	Central	Low	Positional only	39 proteins / 39 hits
IPR052042	Unmapped	-	1067	1208	InterPro	Tail sheath structural protein	-	-	-	-
IPR020287	TAS	DC_0666	1105	1203	InterPro cluster	Tail sheath protein, C-terminal domain	C-terminal	High	Text match	43 proteins / 43 hits

Proteins with similar domain architecture

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout

CAB4123098.1

1 1216 aa

Domain	Start	End	Length (AA)	Confidence
N-terminal	1	814	814	0,8869
Central domain	815	1013	200	0,3649
C-terminal	1014	1216	202	0,0174

Note: Constraints were applied during segmentation.
Fixed 55 C-terminal predictions appearing before Central domain

N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Phage

uncultured Caudovirales phage [NCBI] · taxon 2100421

Uroviricota Caudoviricetes Peduoviridae Maltschvirus maltsch

Host No host information

Genbank protein accession

CAB4123098.1 [NCBI]

Genbank nucleotide accession

LR796167 [NCBI]

CDS location

range 231565 -> 235215
strand -

CDS

ATGCCCGATTTAGTTTCTCCCGGCGTTTCAGTAACAGTTACCAACGAGAGCTTCTACACAAGTGCTCCAACTGGCACTGTGCCGCTCATCGTTATTGCCACAGCACAAGACAAGCTGCAACCTGGTACCAACAGTGTGGCACAAAATACAACCAAGGCAACCGCTGGAGAACTCAAGCTGGTTACCAGTCAGCGTGATGTGTTGCAGATGTATGGTGCACCAAACTTCTACAGCGTGGGCGGAACCCCACAGTTTGACAACGAACTCAACGAAGTTGGTTTGTTCAGCTTGTATGAATTCCTGGGAATTGCAACCAATGCTTATGTGATCCGTGCAGACGTTGATTTGGCACAACTGGCTCCCAGCAGTGTGGAACCCACAGGTTCACCCACAAATGGCAGCTACTGGTTGGATACAAGTCAGAGCACCTGGGGCACATTTGTAAGCAATGGCGATCAAAATCCAGCCTTTGCATGGGCGGCCGTGGCACCCATGGTGATTACTGATGCCATGCTCATGGAAAATGTTGTTCAAGGTCGAGCCACCCCTAAAATCACAAGTGGCAGCACAAATAGCATTGTGGGAACCAGCACACTTACAATTAACGGTGTTGACATCAGCCTCAATGCCACAATGACATTGCCTGACATTGCAAATGCCATTAACGGCAACCTTTCATTGCAACTGTTGAACATCACAGCACAAGTTTTCAGCCACAACGAAACATTTAGTAGCAGCAACAACCGAGTGGTGCCAGTTTACAACTTGAGACTGAACAGTCAAGATATTGCCACTGCAATTGACCTGTCCAGTAATACTGATACCAGCACAATGACCAAGTTGGGATTGGATATTAATGCATTAAATGTTGCTGCGCCTCTGACCAGCATGGGATCTGTGGGAGATTTGGCCGTTGACACTGTGAGTGTTAGCCCAGATGGCACACGCAAAAACCGCATTTGGGAAAAAATCAGCGTAGTCACTGTGGACCCAGTGGGTGGAAATACCACCAAGAGCTGGTGGTTTGCTGTGGGAACAACCCCTACAACCACCCTTACCAATGGAACGCATACCAGCAACGTGTTTGCTGGTTGGGACTGGTTGTCTTCGGAACCAGTTGTTGTTGTTGGCGGCGGTGGCAGCACACCTACAATGAACGTCAGTGCTATTGCGGCAACTATTACCATTGGTAATACCATTGGTGGTAGCACGACACTCAGTGTTGGTCCAACCAACACAACTTTGGCCAGCTTTGTTGCAAACATCAATGCTCAATTCAGCGCACACAGCATTAATGCCAATGCAGATGTATACACAAGCGGTATTAATAGCCAGTTGCGTATCACAAACTATGATGGAACCAGCATCAAATTACATGACAGTTTCAACCCCACTGGTAACATAAATGGTATTTGGACCACTGTGGGTATTGACACTAGCCAGACATACTTTGGCGGTGTAACTGCCACAGTGGCAACTCCAACATTCATAGAAGGAGACCAGTTTACTGTGGACATTGGTGGTGGGCCACAAAAAATCACCGTGCTGGCAAGCCCCAATCATACAATTGGCAATGTGGTGGCACAAATCAACACCGCAGTGGGTGTCACTATTGCCACTCAAGCCAGCAACTTCCTCTCCTTGAGCCGTGCTGGCACATACATCAAGTTGCAGGAAATTCATGGATCACCACTAACGAACGCTGGTATTGATGTAGGCGTCAAGTATGCCCGTTCAGCATTCTTCAAAGACTATTACAATGCCAGTTCAACCACTGCATTCACAGTGCCCAGCCTGCCAACAGAATTGTCAGCCAAAAGTATTTGGGTCAACACCACGAGCCAAAACCGTGGTGCCAGCACTCAAGTCAAGCAATATGCAAATGGAACCTGGGTCACACAGAACACTGTGCCGAACACTGGAACTATACCTTGGTTCAAAGACACCAACACTGCAAACTTGAGCTTTGGCGCTCGCAAAAACAACAGCAGCTTGTTCATGTGCTACAATCTAGACAATGCGGCTGTGTCTTCGGACAACGCTATCCCCACAGAGATGACTGCGGAACTGTTGCGTTGGGATGGATCAACATGGTCAACCGCCGGAACAAAAGACAGCCAAACTTGGAACTACGTTCCCAGCACCACCGCACCACAAGGCGCGCCCGCTGATGGCACATTGTGGTATAACACACAGTTGCTTGCAGATGTCATGGTGGGAACCGGACAGCAATGGAAAGGATATAAAAACGTGTATCCTGGGACTGATCCCAATGGCATTATCATTAGCGGCAGTGCACCACTAACACAGAGCACAGGCAGCGCATTGGCAGATTATGACCTCTGGTTGGATTCCAGTGCCACAGCCTACCCTGTCATCAGTCGCTACGTTGCAGGAAGCCGTTCGTGGATCCAAATCGACAACACAGATCATGTGACATCGGCTGGTATTATCTTTGAAGATGCACGCAGCGATGCAGGAAGCCAATACAGCTATAGCACTTCAACTGATGTTCTTGCAGCAAGCGACTACGTGGACAGCGATGCGCCAGATGCCGAATTGCATCCAGCAGGCATGTTGTTGTTCAACACACGTTACAGCACCAATAACGTCAAGCAATGGAGCGCCAACTACTTTGGTGCAGGAAACGGCACATGGGTAACTGCCAGTGGCAACAGCGCCAGTGACTTTACTCCGTATATGGGCCATGCAGCACAGCGCATCATGATTGTCAAAGCCATTCAAGGTGCTCTGCAAGCAAGCGAAGAAGCTCGTGCAGAAGCCGTATATTTCAACTTGTTGGCAACACCCGGTTACCCAGAATGCATTGACGAAATGGTCACGCTCAATACCGACAAAAAAGAAATTGCATTCATTGTGGGTGACACTCCTGCCCACTTGGCACCAACTGGCACTGCAATTGTCAATTGGGCAAGCAACACAGCCAATGCATATGACAATGGCGACGCTGGTTTGGTTACACGCAACGATTATGTGGGCGTTTGGTATCCCTGGGCTCTTAGCACTAACTTGGACGGCAGCTATGTGTTTGTTCCTCCCAGCATGATGGCATTGAGAACCATTGCGTTCAACGATCAAGTAGCTTATCCTTGGTTTGCTCCAGCTGGATTTAACCGTGGCCTGGTAACTGGTGTCAACAGCGTGGGTTACTTGAACACCATTGGTGAATACAAGCCCTTGACCTTGAACCAAGGTCAACGTGATGTGATGTATACTCACAGCATCAACCCCATTGCATACATCCCCAACCGTGGATTGGTGGTGTATGGTCAAAAGACACTGAGCCCCACAACCAGCGCCATGGACCGTATCAACGTGGCACGTTTGATCAACTACCTCAAGTATCAACTTGACAATGTTGCCAAAGTGTTCTTGTTCGAGCCCAATGACAAGCAGACTCGTGACGCAGTGCTTACCACATTCAACGGGTTCTTCAACAACCTGGTTGGTTTGCGTGCCATTTACGACTTTGCTGTGGTTTGTGATGAAACCAACAACACACCGTTCCGCATTGATGCAAATCAGTTGTGGATTGATGTGGCAATCAAGCCCGAAAAGGCAATTGAGTTCATCTACATCCCCATCCGCTTGCTCAACACAGGCGATCCAATGCCCAACGGCACACGATAA

Protein

Domains

Tail Spike Domain Segmentation

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)