Protein

View in Explore
Genbank accession
CDL65278.1 [GenBank]
Protein name
putative phage tail fiber protein
RBP type
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MAANELIPWINSAGEGGVRNSMQEYPGKGTNGPFEFNFAGGYIDPSHVKAYRYDPVSARTYPQTLTFLGPNQVRTSDVIPVGQYVVLYRDTPKNQPLVDYSEGAVMDEANLDKSNDQSVFIAAEMLDRFDAINATSSEAIDRSVTALNTANSALSKSDTAIKTADAATATAGSAVITANGAVTTANAATQTANGALPDVPASDGGRGPDVAVGVQRQRD
Physico‐chemical
properties
protein length:219 AA
molecular weight: 22950,94050 Da
isoelectric point:4,55703
aromaticity:0,06849
hydropathy:-0,32740

Domains

Domains [InterPro]
DC_1152
ATT
1–216
DC_1152
IPR005604
ATT
21–130
IPR005604
CDL65278.1
1 219
Architecture
ATT
ATT 1-216 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Burkholderia phage Bp-AMP4
[NCBI] 		1437329 Uroviricota > Caudoviricetes > Autographivirales > Ampunavirus > Ampunavirus BpAMP1
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CDL65278.1 [NCBI]
Genbank nucleotide accession
HG796221 [NCBI]
CDS location
range 39764 -> 40423
strand +
CDS
ATGGCTGCAAACGAACTCATTCCGTGGATTAATTCGGCGGGTGAGGGCGGGGTTCGGAACTCGATGCAGGAGTACCCCGGCAAAGGCACGAATGGTCCCTTCGAGTTCAACTTCGCAGGCGGCTATATCGACCCGTCGCACGTCAAGGCTTACCGCTACGATCCCGTATCGGCCCGGACGTACCCGCAAACCCTCACCTTTCTCGGCCCCAATCAAGTCCGCACGTCGGACGTGATCCCTGTGGGCCAGTATGTCGTGCTGTACCGCGACACCCCAAAGAACCAACCGCTTGTCGATTACAGCGAAGGTGCTGTGATGGACGAAGCGAACCTCGACAAGAGCAACGACCAGTCCGTGTTCATCGCGGCTGAAATGCTCGACCGATTCGACGCGATCAACGCAACCTCAAGCGAGGCTATCGACCGTTCGGTGACTGCGCTGAACACGGCGAACTCCGCGCTCTCGAAGTCGGACACGGCAATCAAGACAGCCGACGCCGCAACCGCAACCGCTGGTAGCGCCGTCATCACGGCGAACGGCGCGGTGACTACCGCGAACGCGGCGACTCAAACGGCCAACGGTGCCTTACCAGACGTTCCAGCGAGCGATGGTGGGCGAGGCCCCGATGTGGCTGTCGGAGTCCAACGCCAACGCGATTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
350cb69bbf87ac5457e9f46606359c97ae974b2be31b37a238ec63514076ce15
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8556
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Novel phages display a temperature dependent lifestyle choice that underpins the population dynamics of a tropical bacterial pathogen Shan,J., Korbrisate,S., Adler-Lazer,N., Clokie,M. and Galyov,E. 2014-11-14 — GenBank