Phage RBP Database

Genbank accession

CDL65278.1 [GenBank]

Protein name

putative phage tail fiber protein

RBP type

TF

Evidence RBPdetect

Probability 0,90

TF

Evidence RBPdetect2

Probability 0,93

Protein sequence

MAANELIPWINSAGEGGVRNSMQEYPGKGTNGPFEFNFAGGYIDPSHVKAYRYDPVSARTYPQTLTFLGPNQVRTSDVIPVGQYVVLYRDTPKNQPLVDYSEGAVMDEANLDKSNDQSVFIAAEMLDRFDAINATSSEAIDRSVTALNTANSALSKSDTAIKTADAATATAGSAVITANGAVTTANAATQTANGALPDVPASDGGRGPDVAVGVQRQRD

Physico‐chemical properties

protein length:	219 AA
molecular weight:	22950,94050 Da
isoelectric point:	4,55703
aromaticity:	0,06849
hydropathy:	-0,32740

Domain architecture

CDL65278.1

1 219 aa

ATT 21–130 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

IPR005604
ATT

IPR005604

CDL65278.1

1219 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_1152
ATT

DC_1152

CDL65278.1

1219 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR005604	ATT	DC_0240	21	130	InterPro cluster	Bacteriophage T7 tail fibre protein-like, N-terminal domain	Central	Medium	Text match	1326 proteins / 1328 hits

Proteins with similar domain architecture

Phage

Burkholderia phage Bp-AMP4 [NCBI] · taxon 1437329

Uroviricota Caudoviricetes Autographivirales Ampunavirus Ampunavirus BpAMP1

Host No host information

Genbank protein accession

CDL65278.1 [NCBI]

Genbank nucleotide accession

HG796221 [NCBI]

CDS location

range 39764 -> 40423
strand +

CDS

ATGGCTGCAAACGAACTCATTCCGTGGATTAATTCGGCGGGTGAGGGCGGGGTTCGGAACTCGATGCAGGAGTACCCCGGCAAAGGCACGAATGGTCCCTTCGAGTTCAACTTCGCAGGCGGCTATATCGACCCGTCGCACGTCAAGGCTTACCGCTACGATCCCGTATCGGCCCGGACGTACCCGCAAACCCTCACCTTTCTCGGCCCCAATCAAGTCCGCACGTCGGACGTGATCCCTGTGGGCCAGTATGTCGTGCTGTACCGCGACACCCCAAAGAACCAACCGCTTGTCGATTACAGCGAAGGTGCTGTGATGGACGAAGCGAACCTCGACAAGAGCAACGACCAGTCCGTGTTCATCGCGGCTGAAATGCTCGACCGATTCGACGCGATCAACGCAACCTCAAGCGAGGCTATCGACCGTTCGGTGACTGCGCTGAACACGGCGAACTCCGCGCTCTCGAAGTCGGACACGGCAATCAAGACAGCCGACGCCGCAACCGCAACCGCTGGTAGCGCCGTCATCACGGCGAACGGCGCGGTGACTACCGCGAACGCGGCGACTCAAACGGCCAACGGTGCCTTACCAGACGTTCCAGCGAGCGATGGTGGGCGAGGCCCCGATGTGGCTGTCGGAGTCCAACGCCAACGCGATTGA

Title	Authors	Date	PMID	Source
Novel phages display a temperature dependent lifestyle choice that underpins the population dynamics of a tropical bacterial pathogen	Shan,J., Korbrisate,S., Adler-Lazer,N., Clokie,M. and Galyov,E.	2014-11-14	—	GenBank

Protein

Domains

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)

Literature