Phage RBP Database

Genbank accession

CDL65278.1 [GenBank]

Protein name

putative phage tail fiber protein

RBP type

TF

Evidence RBPdetect

Probability 0,90

TF

Evidence RBPdetect2

Probability 0,93

Seq2Symm

C3 confidence 0,999

C3	0,999
C6	0,004
D3	0,002

Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).

Protein sequence

MAANELIPWINSAGEGGVRNSMQEYPGKGTNGPFEFNFAGGYIDPSHVKAYRYDPVSARTYPQTLTFLGPNQVRTSDVIPVGQYVVLYRDTPKNQPLVDYSEGAVMDEANLDKSNDQSVFIAAEMLDRFDAINATSSEAIDRSVTALNTANSALSKSDTAIKTADAATATAGSAVITANGAVTTANAATQTANGALPDVPASDGGRGPDVAVGVQRQRD

Physico‐chemical properties

protein length:	219 AA
molecular weight:	22950,94050 Da
isoelectric point:	4,55703
aromaticity:	0,06849
hydropathy:	-0,32740

Domain architecture

CDL65278.1

1 219 aa

ATT 21–130 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

IPR005604
ATT

IPR005604

CDL65278.1

1219 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_1152
ATT

DC_1152

CDL65278.1

1219 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR005604	ATT	DC_0240	21	130	InterPro cluster	Bacteriophage T7 tail fibre protein-like, N-terminal domain	Central	Medium	Text match	1326 proteins / 1328 hits

Proteins with similar domain architecture

Phage

Burkholderia phage Bp-AMP4 [NCBI] · taxon 1437329

Uroviricota Caudoviricetes Autographivirales Ampunavirus Ampunavirus BpAMP1

Host No host information

Genbank protein accession

CDL65278.1 [NCBI]

Genbank nucleotide accession

HG796221 [NCBI]

CDS location

range 39764 -> 40423
strand +

CDS

ATGGCTGCAAACGAACTCATTCCGTGGATTAATTCGGCGGGTGAGGGCGGGGTTCGGAACTCGATGCAGGAGTACCCCGGCAAAGGCACGAATGGTCCCTTCGAGTTCAACTTCGCAGGCGGCTATATCGACCCGTCGCACGTCAAGGCTTACCGCTACGATCCCGTATCGGCCCGGACGTACCCGCAAACCCTCACCTTTCTCGGCCCCAATCAAGTCCGCACGTCGGACGTGATCCCTGTGGGCCAGTATGTCGTGCTGTACCGCGACACCCCAAAGAACCAACCGCTTGTCGATTACAGCGAAGGTGCTGTGATGGACGAAGCGAACCTCGACAAGAGCAACGACCAGTCCGTGTTCATCGCGGCTGAAATGCTCGACCGATTCGACGCGATCAACGCAACCTCAAGCGAGGCTATCGACCGTTCGGTGACTGCGCTGAACACGGCGAACTCCGCGCTCTCGAAGTCGGACACGGCAATCAAGACAGCCGACGCCGCAACCGCAACCGCTGGTAGCGCCGTCATCACGGCGAACGGCGCGGTGACTACCGCGAACGCGGCGACTCAAACGGCCAACGGTGCCTTACCAGACGTTCCAGCGAGCGATGGTGGGCGAGGCCCCGATGTGGCTGTCGGAGTCCAACGCCAACGCGATTGA

Title	Authors	Date	PMID	Source
Novel phages display a temperature dependent lifestyle choice that underpins the population dynamics of a tropical bacterial pathogen	Shan,J., Korbrisate,S., Adler-Lazer,N., Clokie,M. and Galyov,E.	2014-11-14	—	GenBank

Protein

Domains

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)

Literature