Phage RBP Database

UniProt accession

S0A0V0 [UniProt]

Protein name

Pectate lyase

RBP type

TSP

Evidence DepoScope

Probability 1,00

TSP

Evidence RBPdetect2

Probability 0,64

Protein sequence

MIKNLLILLITFNCFSQGKIGFNAALSSQSSGLVNPVVSINLTELKSFPTAEGWGKFTGVGQTARTNRYVTNLNDSGSGSLREASTIANSNVLFKISGEITLLSTINLANNVQVLGQTAFVNDGEGITIRQNETFNTPLMTTSGHNVIRYIRFRRGKGLAEEGSGDNVQVNGNYHIFDHCSFSWGTDEQISNGAGGASYVTIQNSIISEGLFLASHTYSTDDESTEYQNGHSKGSLFGNFTLKTEKISFIRNLFAHNDDRNPSIRRGGLYEIVNNIFYNNRYANTILKTVEPTDPINANIIGNLYKAGLDTRTTRYEISSEEGTINNIYLNGNIGWNKTSLGSGNEWDIVGNSSTKIANDGQSLSSFESQYSYSDLISATTLESELLDKVGSNIKKDDIDTRVILDVINETPTTPLLMSDYSTTTASYTGAETYYGIINDPLDVGGWQLFTPTTINITDTDVNFIPDNYTQPSINNTAGYSSLQIYLADIANDFKY

Physico‐chemical properties

protein length:	496 AA
molecular weight:	54324,29980 Da
isoelectric point:	4,76029
aromaticity:	0,09677
hydropathy:	-0,31714

Domain architecture

S0A0V0

1 496 aa

STR 37–400 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

IPR012334
STR

IPR012334

IPR052063
Unmapped

IPR052063

IPR011050
STR

IPR011050

S0A0V0

1496 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR012334	STR	IPR012334	37	389	Merged direct domain	Pectin lyase fold	Central	Low	Positional only	867 proteins / 867 hits
IPR052063	Unmapped	-	40	470	InterPro	Polysaccharide Lyase 1	-	-	-	-
IPR011050	STR	IPR011050	48	400	Merged direct domain	Pectin lyase fold/virulence factor	Central	Low	Positional only	572 proteins / 572 hits

Proteins with similar domain architecture

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout

S0A0V0

1 496 aa

Domain	Start	End	Length (AA)	Confidence
N-terminal	1	79	79	0,6305
Central domain	80	337	259	0,8919
C-terminal	338	496	158	0,4876

Note: Constraints were applied during segmentation.
Fixed 26 C-terminal predictions appearing before Central domain

N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Phage

Cellulophaga phage phi10:1 [NCBI] · taxon 1327981

Uroviricota Caudoviricetes Assiduviridae Cebadecemvirus phi10una

Host

Cellulophaga baltica [NCBI] · taxon 76594

cellular organisms Bacteria Pseudomonadati FCB group Bacteroidota/Chlorobiota group Bacteroidota

No CDS data available.

	Description	Category	Evidence (source)
GO:0044423	virion component	Cellular Component	IEA:UniProtKB-KW (UniProt)
GO:0016829	lyase activity	Molecular Function	IEA:UniProtKB-KW (UniProt)
GO:0046872	metal ion binding	Molecular Function	IEA:UniProtKB-KW (UniProt)
GO:0051701	biological process involved in interaction with host	Biological Process	IEA:UniProtKB-ARBA (UniProt)
GO:0019058	viral life cycle	Biological Process	IEA:UniProtKB-ARBA (UniProt)

Protein

Domains

Tail Spike Domain Segmentation

Taxonomy

Coding sequence (CDS)

Genome Context

Gene Ontology

Tertiary structure

Predicted Aligned Error (PAE)