Protein

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UniProt accession
S0A0V0 [UniProt]
Protein name
Pectate lyase
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,90
Protein sequence
MIKNLLILLITFNCFSQGKIGFNAALSSQSSGLVNPVVSINLTELKSFPTAEGWGKFTGVGQTARTNRYVTNLNDSGSGSLREASTIANSNVLFKISGEITLLSTINLANNVQVLGQTAFVNDGEGITIRQNETFNTPLMTTSGHNVIRYIRFRRGKGLAEEGSGDNVQVNGNYHIFDHCSFSWGTDEQISNGAGGASYVTIQNSIISEGLFLASHTYSTDDESTEYQNGHSKGSLFGNFTLKTEKISFIRNLFAHNDDRNPSIRRGGLYEIVNNIFYNNRYANTILKTVEPTDPINANIIGNLYKAGLDTRTTRYEISSEEGTINNIYLNGNIGWNKTSLGSGNEWDIVGNSSTKIANDGQSLSSFESQYSYSDLISATTLESELLDKVGSNIKKDDIDTRVILDVINETPTTPLLMSDYSTTTASYTGAETYYGIINDPLDVGGWQLFTPTTINITDTDVNFIPDNYTQPSINNTAGYSSLQIYLADIANDFKY
Physico‐chemical
properties
protein length:496 AA
molecular weight: 54324,29980 Da
isoelectric point:4,76029
aromaticity:0,09677
hydropathy:-0,31714

Domains

Domains [InterPro]
IPR012334
STR
37–389
IPR012334
IPR052063
Unmapped
40–470
IPR052063
IPR011050
STR
48–400
IPR011050
S0A0V0
1 496
Architecture
STR
STR 37-400 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
S0A0V0
1 496
Domain Start End Length (AA) Confidence
N-terminal 1 79 79 0,6305
Central domain 80 337 259 0,8919
C-terminal 338 496 158 0,4876
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-79
Central
80-337
C-terminal
338-496

Taxonomy

  Name Taxonomy ID Lineage
Phage Cellulophaga phage phi10:1
[NCBI] 		1327981 Uroviricota > Caudoviricetes > Assiduviridae > Cebadecemvirus phi10una >
Host Cellulophaga baltica
[NCBI] 		76594 cellular organisms > Bacteria > Pseudomonadati > FCB group > Bacteroidota/Chlorobiota group > Bacteroidota

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Genome Context

Genome Context

Gene Ontology

Description Category Evidence (source)
GO:0044423 virion component Cellular Component IEA:UniProtKB-KW (UniProt)
GO:0016829 lyase activity Molecular Function IEA:UniProtKB-KW (UniProt)
GO:0046872 metal ion binding Molecular Function IEA:UniProtKB-KW (UniProt)
GO:0051701 biological process involved in interaction with host Biological Process IEA:UniProtKB-ARBA (UniProt)
GO:0019058 viral life cycle Biological Process IEA:UniProtKB-ARBA (UniProt)

Tertiary structure

PDB ID
7d2fe64b722e0c3e1582dbe389d4127df1411678ef0309d5d524fe9da2c1635d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7944
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50