Protein

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Genbank accession
YP_001111102.1 [GenBank]
Protein name
gp23
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect2
Probability 0,45
Seq2Symm
C3 confidence 1,000
C3 1,000
C6 0,031
C1 0,027
Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).
Protein sequence
MPAGFQAFTDTGVYQIDGRTPNYQMVQSMVADSAVGSLPLARNDAGRTFMIDLPSVTFTFSSVAGPMYAVLASGAVGITLWGAKRNGSSYSVTFVTERPCNVRLFVFDQVPVAAGNFGLQVFDAGGRLVADSSKPFLRVLDVIFEDYMNGVGWTVEGAPSPPWHSRSYGVPVLISAIYSVHRAWSYDPGVVELSSIRVDGGNVSWGTALYNGGRTPNIACFREQYHSRFMVLDGTGIV
Physico‐chemical
properties
protein length:238 AA
molecular weight: 25657,76380 Da
isoelectric point:5,86973
aromaticity:0,12185
hydropathy:0,13697

Tail Spike Domain Segmentation

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout
YP_001111102.1
1 238 aa
Domain Start End Length (AA) Confidence
N-terminal 1 15 15 0,9617
Central domain 16 214 200 0,0027
C-terminal 215 238 23 0,9979
N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Taxonomy

Phage
Burkholderia phage phi644-2 [NCBI] · taxon 2881400
Uroviricota Caudoviricetes Stanholtvirus
Host
Burkholderia pseudomallei [NCBI] · taxon 28450
cellular organisms Bacteria Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales

Coding sequence (CDS)

Genbank protein accession
YP_001111102.1 [NCBI]
Genbank nucleotide accession
NC_009235 [NCBI]
CDS location
range 20743 -> 21459
strand +
CDS
ATGCCGGCAGGATTTCAGGCATTCACTGATACCGGTGTGTATCAGATCGACGGGCGAACGCCGAACTACCAGATGGTCCAATCGATGGTGGCGGATTCTGCGGTCGGTTCGTTGCCTTTGGCACGGAATGATGCTGGGCGGACGTTCATGATAGATCTTCCGAGTGTCACTTTCACTTTCTCGTCAGTGGCGGGTCCGATGTACGCGGTACTCGCATCTGGCGCAGTGGGAATCACGCTGTGGGGTGCGAAGCGAAACGGAAGTTCGTATTCCGTGACGTTTGTCACCGAGCGACCATGTAACGTCCGACTGTTCGTGTTCGACCAAGTACCCGTCGCCGCGGGAAACTTCGGGTTGCAGGTTTTCGATGCTGGCGGACGATTGGTCGCGGATTCGTCGAAGCCGTTTCTCCGGGTCCTCGATGTGATCTTCGAGGATTACATGAACGGTGTTGGGTGGACAGTCGAGGGCGCACCTTCGCCGCCGTGGCATTCTCGGTCGTACGGCGTGCCAGTTCTGATTTCCGCCATCTACTCCGTTCATCGAGCGTGGAGCTATGACCCGGGGGTGGTTGAGCTCTCGTCGATTCGCGTTGACGGTGGGAATGTGTCTTGGGGAACGGCGCTGTACAACGGTGGGAGAACGCCGAATATCGCATGCTTTCGCGAGCAGTATCACTCGCGATTCATGGTGCTTGACGGGACGGGAATCGTTTAG

Genome Context

Tertiary structure

YP_001111102.1
ESMFold structure
Source ESMFold
pLDDT 81.7
Oligomeric state monomer
Download structure