Protein

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Genbank accession
AZF95058.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 0,99
Protein sequence
MNRIVEPNLVNGLEHVDARYRAEPATETRKKLTALFRVGEVQKAETVRTLSKEQSKEIKEQVYCAAEAVFLNSSERKSEYSARVAKDFCIDKDLMMLYSRIFGAVAKGATVETDDNQVRSYYLQHAAAWGKAKMFQLDLPDLKRPDFIMALCHSPRDTSGFLDEVASTYRGLLSTRVLPQEAAAYDLVPSKRGYGVVGSGRYTNHYTAPAWSQLLGIQYTAEDTAWFAGFLTEDDVINLRFRRMRMGAAVKEVTGEDALARELSDKCRIVGTYQFILHPNDVPWGEEYVRMWRDGVDLDSCMSRPGGDYNCPHGVHPCDAYSSAHYGAGDNGLVLVEAQHAGKPVGRGILNTRNNQIVRWYGKYRAKVQLCNAYGIKEDSDALEASWLALIGNGATFAGPYIDGFNDCGDVNEFEGRVYLGTRGLTLEDTDGYYYGGGRQQCCIDEEYYPGDDMQYQEHNDTWYHPDNTGDAETCPVTDEYFSYSDGYWLMIDGEEIRVSWAGYHRIDTHDYTNLGGDIGYTLDIDRYRLLANGDWVHQDDAVYDEETDDWYTDEEHAVLLADREAQEEEQDAA
Physico‐chemical
properties
protein length:574 AA
molecular weight: 64870,97870 Da
isoelectric point:4,69231
aromaticity:0,11324
hydropathy:-0,57648

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AZF95058.1
1 574
Domain Start End Length (AA) Confidence
N-terminal 1 369 369 0,0012
Central domain 370 563 195 0,7485
C-terminal 564 574 10 0,9956
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-369
Central
370-563
C-terminal
564-574

Taxonomy

  Name Taxonomy ID Lineage
Phage Pectobacterium phage Zenivior_B1
[NCBI] 		2489636 Uroviricota > Caudoviricetes > Autographivirales > Corkvirinae > Phimunavirus
Host Pectobacterium atrosepticum
[NCBI] 		29471 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AZF95058.1 [NCBI]
Genbank nucleotide accession
MK095211 [NCBI]
CDS location
range 35727 -> 37451
strand -
CDS
ATGAATCGTATCGTTGAACCTAACTTAGTTAATGGCCTTGAACACGTCGATGCACGTTACCGTGCTGAACCCGCGACAGAGACACGCAAGAAACTCACTGCGTTGTTCCGTGTTGGTGAGGTGCAGAAAGCCGAGACAGTACGAACTCTTTCCAAGGAGCAATCCAAAGAGATTAAAGAGCAGGTGTACTGTGCAGCGGAGGCTGTATTTCTAAACAGTTCCGAACGTAAGTCAGAGTACTCCGCGCGGGTGGCAAAAGATTTCTGTATTGATAAAGACTTAATGATGCTGTACTCCCGTATCTTCGGTGCTGTAGCGAAGGGTGCTACGGTAGAGACAGATGACAACCAAGTGCGCTCTTACTACCTACAGCACGCAGCGGCGTGGGGTAAGGCGAAGATGTTCCAATTGGACCTCCCGGATTTAAAACGCCCAGATTTCATTATGGCGTTATGCCATTCGCCTCGTGATACTTCTGGTTTTTTAGATGAAGTAGCGAGTACATATAGGGGATTGTTAAGTACGAGAGTACTTCCCCAGGAAGCAGCCGCATACGATTTAGTTCCTAGCAAGCGTGGATACGGCGTAGTGGGTTCCGGCAGGTACACCAATCATTACACGGCCCCAGCTTGGTCCCAGTTGTTGGGTATCCAGTACACAGCAGAAGATACCGCGTGGTTCGCTGGATTCCTGACAGAGGATGATGTAATTAATCTGCGATTCCGCAGAATGCGTATGGGCGCAGCGGTGAAGGAAGTAACGGGAGAGGATGCGTTAGCTCGTGAACTATCCGATAAGTGCCGCATAGTGGGTACGTACCAGTTCATCCTACATCCTAATGACGTGCCGTGGGGCGAAGAGTACGTCCGTATGTGGCGAGATGGGGTAGACTTAGATAGTTGTATGTCACGCCCGGGGGGTGACTATAACTGCCCACATGGTGTGCATCCGTGTGATGCGTACTCAAGTGCACATTACGGGGCCGGGGATAACGGCTTAGTCCTAGTTGAAGCACAGCACGCAGGTAAACCGGTAGGGCGCGGTATCTTGAACACGCGCAACAACCAGATTGTGCGCTGGTACGGCAAGTACCGCGCGAAGGTACAACTTTGTAATGCTTACGGTATTAAAGAAGATTCAGATGCCCTAGAAGCTTCATGGTTAGCATTGATTGGTAATGGTGCTACGTTCGCTGGGCCGTACATTGATGGTTTTAATGATTGTGGAGATGTGAATGAATTCGAGGGGCGGGTGTACTTAGGTACAAGAGGCCTTACACTAGAAGATACAGATGGGTACTACTATGGTGGGGGTAGGCAGCAATGCTGTATTGATGAGGAGTACTACCCAGGAGATGACATGCAGTACCAAGAACATAATGATACTTGGTATCATCCAGACAATACCGGAGATGCCGAGACTTGCCCGGTAACAGATGAGTACTTCTCGTACAGCGATGGGTACTGGTTAATGATTGACGGAGAAGAGATCCGTGTGTCATGGGCAGGGTACCATCGCATTGATACACACGATTATACAAACCTAGGTGGGGATATCGGGTACACTCTGGACATTGACCGGTACCGTCTGTTAGCTAATGGTGATTGGGTGCATCAGGATGATGCGGTGTACGACGAAGAAACCGATGATTGGTACACCGACGAAGAGCATGCTGTATTGCTTGCAGACCGAGAAGCACAAGAGGAAGAACAAGATGCAGCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
19dfd1f78b40d7f3e21f78817aef280f47a8326b467642900d315d622eba3b18
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,4703
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A novel 6-phage cocktail reduces Pectobacterium atrosepticum soft rot infection in potato tubers under simulated storage conditions Carstens,A.B. 2019-05-01 — GenBank