Phage RBP Database

Genbank accession

ANT42499.1 [GenBank]

Protein name

tail fiber protein

RBP type

TF

Evidence Phold

Probability 1,00

Seq2Symm

C2 confidence 0,588

C2	0,588
C6	0,024
C1	0,021

Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).

Protein sequence

MILENACDYKEYLGSVFDAMGFNGSFEVVGNAIHLNIITSDNQETPTKDQVLEKLKEITLKHKKQELEKEINAICKEKIIKDFRSSVLGSLHAYDLALEDQANLQALVIANIDSIFRCAEVNNGVIGAKTYKNHTKAQILQLSKEALTFKQKLIIFYGKEKERLNAITSLEALKKFAIKDYLT

Physico‐chemical properties

protein length:	183 AA
molecular weight:	20669,64310 Da
isoelectric point:	6,90607
aromaticity:	0,07650
hydropathy:	-0,21202

Domain architecture

ANT42499.1

1 183 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

Coil
Unmapped

Coil

ANT42499.1

1183 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_0271
STR

DC_0271

ANT42499.1

1183 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
Coil	Unmapped	-	48	68	Coils	Coil	-	-	-	-

Proteins with similar domain architecture

Phage

Helicobacter phage UKEN31U [NCBI] · taxon 1852687

Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes

Host

Helicobacter pylori [NCBI] · taxon 210

cellular organisms Bacteria Pseudomonadati Campylobacterota Epsilonproteobacteria Campylobacterales

Genbank protein accession

ANT42499.1 [NCBI]

Genbank nucleotide accession

KX119174.1 [NCBI]

CDS location

range 15107 -> 15658
strand +

CDS

ATGATTTTAGAAAACGCATGCGATTATAAGGAATATTTAGGAAGTGTTTTTGATGCAATGGGATTTAATGGCAGTTTTGAAGTGGTAGGTAACGCCATACATCTTAACATTATCACAAGCGATAACCAAGAAACGCCGACTAAAGATCAGGTTTTAGAAAAACTCAAAGAAATCACGCTTAAACACAAAAAACAAGAACTAGAAAAAGAAATTAACGCTATCTGTAAAGAAAAAATCATTAAAGATTTTAGAAGTAGCGTTTTAGGGAGCCTTCATGCTTATGATTTAGCGTTAGAAGATCAAGCGAACTTGCAAGCGCTAGTTATAGCGAACATTGATTCGATTTTTAGGTGCGCTGAAGTTAATAACGGCGTTATAGGTGCTAAAACTTATAAAAACCACACGAAAGCGCAGATCTTGCAATTATCCAAAGAAGCGCTGACATTCAAGCAAAAACTGATTATTTTCTACGGCAAAGAAAAAGAACGCCTGAACGCTATCACTAGTTTAGAAGCGTTAAAGAAATTTGCAATTAAAGATTATTTGACATGA

Protein

Domains

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)