Phage RBP Database

Genbank accession

WBY65460.1 [GenBank]

Protein name

tail fiber protein

RBP type

TF

Evidence UniProt/TrEMBL

Probability 1,00

TF

Evidence Phold

Probability 1,00

TF

Evidence RBPdetect2

Probability 0,95

Seq2Symm

C3 confidence 0,993

C3	0,993
C1	0,041
I	0,005

Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).

Protein sequence

MATLVTQDFEREIAEKTVNGGVIQYDEFIFAMIPNLTADNLAQHLTIPSESLIKHRQAVSKAGVINENAVVYSVTLGTEIGDFDFNWIGLINKRTNKLAAAVQADTIKKTRNKNNVQGNSLTRNVLLEFTGAKQLTGISVSADTWQIDFTVRLHGIDEKIRLTNRDLYGRAVFFDDAFLVKRGAGNNYTIDAGHAYIEGVRAEIKQAQTIQAASLPCSIYVDVVHHCTVTGAYETEIKFLKQSKSDYLDTARRQHYVQIIADIDSTGAVTDRRLLSPWFGITPKDLDDTTESARDKTGHTHKLPLASLIKKGLVKLYSGNDSDSEEMAATPKAVKTLKGFIDSLTRSLNNYIPNSKKSSAVNSNSEDTIGTSKAVKIAYDRAVEAEKKGLPVGAIVAFHKSAKPHGYLKAIGGTFNRATYPDLYVANGNSEIIPNLHRSDVGMTAYFAFDEIPDGWIAFDSIQSTVTQSSYPELYTHLVAKYGSIAQVPLAEDRFIRNAGRGLNVGKTQEDAIRNIKGQITIDDYSRETINGAFKFIGEGTAAGNRGGGTLIEFDASRVVPTADENRPKSIVLKLCIKAKNSFDDVIFWIKAFGEVVNSGSLDAGTIAQDLQQVRSKTQQLELLFNQNKAETALKIQDIEEKLNEERKVSKVIWSGNVTQNSTSVLELSESILNTTLVFYLQVSQGHSLQQNVDTHMMSAFVDEKLIHVSGRKYIHSAFYVGGWKSVQIEIVEDRKIKIIEASSMYLKQITKI

Physico‐chemical properties

protein length:	753 AA
molecular weight:	83184,11150 Da
isoelectric point:	7,00958
aromaticity:	0,07968
hydropathy:	-0,26680

Domain architecture

WBY65460.1

1 753 aa

ATT 3–157 · STR 307–337 · STR 358–386 · ATT 389–440 · STR 441–579 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

IPR022225
ATT

IPR022225 IPR051934 IPR005068 IPR037053 SSF88874 Coil

IPR022225
ATT

IPR022225 IPR005068 IPR037053

SSF88874
STR

SSF88874

WBY65460.1

1753 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_1854
STR

DC_1854 DC_1811

DC_0818
RBD

DC_0818

WBY65460.1

1753 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR022225	ATT	DC_0271	3	157	InterPro cluster	Phage tail fibre protein, N-terminal domain	Central	Medium	Text match	271 proteins / 271 hits
IPR022225	ATT	DC_0271	3	150	InterPro cluster	Phage tail fibre protein, N-terminal domain	Central	Medium	Text match	271 proteins / 271 hits
IPR051934	Unmapped	-	296	338	InterPro	Bacteriophage Tail Fiber Structural Protein	-	-	-	-
IPR005068	STR	DC_0738	307	337	InterPro cluster	Bacteriophage lambda, Tail fiber protein, repeat-2	Central	High	Text match	217 proteins / 347 hits
IPR005068	STR	DC_0738	358	386	InterPro cluster	Bacteriophage lambda, Tail fiber protein, repeat-2	Central	High	Text match	217 proteins / 347 hits
IPR037053	ATT	IPR037053	389	440	Merged direct domain	Phage tail collar domain superfamily	N-terminal	Low	Positional only	37 proteins / 37 hits
IPR037053	ATT	IPR037053	389	425	Merged direct domain	Phage tail collar domain superfamily	N-terminal	Low	Positional only	37 proteins / 37 hits
SSF88874	STR	SSF88874	390	436	Merged direct domain	SSF88874	Central	Low	Positional only	109 proteins / 109 hits
SSF88874	STR	SSF88874	441	579	Merged direct domain	SSF88874	Central	Low	Positional only	109 proteins / 109 hits
Coil	Unmapped	-	629	649	Coils	Coil	-	-	-	-

Proteins with similar domain architecture

Phage

Pasteurella phage vB_PmuM_CFP3 [NCBI] · taxon 3017169

Uroviricota Caudoviricetes Peduoviridae Irtavirus Irtavirus CFP3

Host

Pasteurella multocida [NCBI] · taxon 747

Pseudomonadota Gammaproteobacteria Pasteurellales Pasteurellaceae Pasteurella Pasteurella multocida

No CDS data available.

Protein

Domains

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)