Protein

View in Explore
Genbank accession
QBQ72841.1 [GenBank]
Protein name
putative tail structural protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,89
TF
Evidence RBPdetect2
Probability 0,94
TF
Evidence Phold
Probability 1,00
Protein sequence
MTRARDLANSADKDIAGTLTLDDLSVEGNITVTGTVDSRDINTDGTKLDGIEAGADVTDTANVSAAGAAMETGAAFTGNITFGDNDKAIFGAGSDLSIYHDGTNNRLTFNSANTYIQTDGIIHFTNIGNTEKHLTINDDGAVDLYHNNNLKLATTSTGIDVTGTAVTDGLTVAGNVSVDGGTIKLDGNYPVGTGNVALGDTALDSVSTGARNTAIGSSALTANNTNDNTALGFSALSASISDANVAIGTYALQANTTGNSNVSVGRSALLSDTTGSNNTGLGRDALRNNTTSNNNTAVGYQAGYSNTTGPNLTALGRWALYNNTTGADNTAVGLNALLNNSTGSSNIAVGQQALNSNTTASYNTAVGYQAGYSNTTGTQITALGVQSLKLNTTGNYNSAVGVNSLLSNTTGSNNTAIGDSSLINNTTGGANTAFGKDALLSNTTANNNTAVGYRAGYNTTTGESNVFIGGRSWDSGYGAGNNNTTGNYNIAIGSSTLGNNTTASNNTAVGHQAAYYNTTGTYNAFFGLEAGKANTTGSYNTVVGYKAGITATTANFNTYLGTFAGELGSGGKNTFVGNNAGVYVSSGNRNTIIGRYDGNQGGVDIRTSSNNIVLSDGDGNPRLYYSSLYKTWIAPYNGDTDGGRGGAPKISLSSGNTNYDCSIGMTDAVSKNVWWGLVGGNAYVMNVNNGVQLSSGATSWASVSDARLKTVTGTYTNAVDDLSQIEAVKFTWNADEDNTPQVGVIAQSVQSVVPEAMSVSEEDGVEYLSVRYTELIPLMIASIQEQQSTITALEARITALENA
Physico‐chemical
properties
protein length:803 AA
molecular weight: 82196,67750 Da
isoelectric point:4,38492
aromaticity:0,06725
hydropathy:-0,27696

Domains

Domains [InterPro]
IPR011049
337–481
IPR011049 IPR030392 Coil
IPR030392
704–797
IPR030392
QBQ72841.1
1 803
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Roseobacter phage CRP-7
[NCBI] 		2559286 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QBQ72841.1 [NCBI]
Genbank nucleotide accession
MK613349 [NCBI]
CDS location
range 38536 -> 40947
strand -
CDS
ATGACTAGAGCAAGAGACTTAGCTAACAGTGCTGACAAGGATATTGCGGGTACCCTTACACTTGATGACTTATCTGTTGAGGGTAATATTACCGTAACAGGTACTGTTGATAGCAGAGATATTAATACTGATGGCACTAAGCTAGATGGCATTGAGGCTGGTGCAGACGTAACTGATACAGCTAATGTAAGTGCTGCTGGCGCTGCAATGGAAACAGGTGCAGCTTTTACTGGCAACATAACCTTCGGTGACAACGACAAAGCCATCTTCGGCGCTGGGTCTGACCTCAGCATATATCATGATGGTACTAATAATAGACTTACTTTCAATTCAGCCAACACTTACATACAAACAGATGGTATTATCCATTTCACAAACATAGGTAATACTGAAAAACACCTTACGATTAACGATGACGGGGCTGTAGACCTTTACCACAACAACAATTTAAAACTCGCCACCACCTCCACAGGTATTGACGTAACTGGCACAGCCGTAACGGACGGTTTAACCGTAGCTGGCAACGTGTCAGTCGATGGCGGCACAATCAAGCTGGACGGGAATTATCCTGTTGGTACAGGCAACGTGGCGTTGGGTGATACTGCGTTGGATAGTGTAAGCACGGGGGCAAGAAATACCGCTATAGGGTCTTCTGCTCTTACTGCAAACAACACGAACGACAACACGGCTTTGGGCTTTAGTGCCTTGTCTGCTTCTATTTCTGACGCAAATGTTGCAATAGGAACTTATGCTCTACAAGCAAATACTACAGGCAATAGCAATGTTTCTGTTGGTCGTTCCGCTTTATTAAGTGACACCACGGGAAGCAACAATACAGGTCTGGGACGTGATGCCCTACGCAACAACACCACCTCAAACAACAACACAGCCGTTGGCTATCAGGCTGGTTACAGTAATACGACAGGGCCAAATTTAACAGCATTGGGCAGGTGGGCGCTATATAACAACACGACTGGCGCAGATAATACAGCAGTTGGCCTTAATGCTTTGCTTAACAACTCAACAGGTAGTTCTAACATTGCAGTTGGGCAGCAAGCACTTAACTCCAACACCACCGCATCCTATAACACTGCCGTTGGGTATCAAGCTGGGTATAGTAATACTACTGGCACTCAAATAACTGCTTTAGGTGTTCAATCTTTAAAACTTAATACAACAGGTAACTATAATAGCGCAGTTGGCGTTAATAGTTTGTTGTCAAACACCACAGGGTCTAACAATACCGCTATAGGTGATAGCTCACTTATAAACAACACGACAGGTGGAGCAAACACCGCATTTGGTAAAGATGCCCTCCTCTCCAACACCACCGCAAATAACAACACGGCAGTTGGATACCGTGCTGGCTACAACACCACAACAGGTGAAAGTAACGTATTCATTGGCGGCAGAAGCTGGGACAGTGGTTACGGTGCGGGTAACAACAACACGACAGGGAATTATAACATAGCCATCGGCTCAAGCACTTTGGGCAATAATACGACTGCAAGCAACAACACGGCTGTTGGGCATCAGGCTGCGTATTATAATACGACAGGAACGTACAACGCTTTCTTTGGCCTTGAGGCTGGGAAGGCTAATACCACAGGCAGTTACAACACTGTGGTAGGCTATAAAGCTGGCATTACAGCGACAACAGCTAATTTTAACACATACTTGGGGACATTTGCTGGTGAACTAGGTAGCGGTGGAAAAAACACATTTGTGGGTAACAACGCAGGTGTCTATGTATCTTCGGGCAACAGAAACACCATCATAGGCCGCTACGATGGCAACCAAGGCGGCGTAGACATCCGCACCTCAAGCAACAACATCGTGCTGTCGGATGGGGATGGTAATCCTAGGTTGTATTACTCTTCTTTATACAAAACTTGGATAGCTCCATATAACGGAGATACTGATGGTGGTAGAGGCGGTGCGCCAAAAATAAGCCTGAGTTCTGGCAACACCAATTACGACTGTAGCATTGGTATGACTGACGCTGTTTCTAAAAACGTGTGGTGGGGTTTAGTTGGCGGAAACGCATATGTAATGAACGTCAACAATGGTGTTCAGCTTAGTTCGGGTGCAACTTCTTGGGCTTCTGTTTCTGACGCTAGACTAAAAACGGTCACTGGCACATACACAAATGCTGTAGACGATCTGTCCCAAATTGAGGCTGTTAAGTTTACTTGGAACGCAGATGAAGACAACACACCTCAAGTTGGTGTAATAGCGCAATCGGTGCAGTCAGTTGTTCCCGAAGCTATGAGTGTTTCAGAAGAGGATGGAGTTGAATACCTTTCTGTTCGATACACTGAACTGATCCCACTTATGATTGCCTCTATCCAAGAGCAGCAATCAACTATTACTGCATTAGAGGCACGGATCACTGCCCTAGAAAACGCTTAA

Tertiary structure

PDB ID
2bb909a42d44448865cc553634caa639a87cf12c15a9406b1f31a3dd9efdae15
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2777
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Diverse, abundant and novel viruses infecting the marine abundant Roseobacter RCA lineage Zhang,Z.F., Chen,F., Chu,X., Zhang,H., Luo,H.W., Zhai,Z.Q., Yang,M.Y. and Zhao,Y.L. 2019 — GenBank