Protein

View in Explore
Genbank accession
YP_009604505.1 [GenBank]
Protein name
lysozyme-like protein
RBP type
TF
Evidence RBPdetect
Probability 0,86
Protein sequence
MAENIVESIIVKLGLDGSQYNREAEKAKSNNDKLNKSVSETDKIVGNVTKTLARWFSVAAAATGILKMVDQVQKLNDELYHLERNLGMSASTIKNWQGAAGAMGGSAQGMTESIKSLNMGMNDFVTMGDTTLLPFMNALGVGMVDAQGKLRKTDDVMLDLADSFSKMDREQAFSIASKMGIDEGTFNTLVQGRKEMEKMLEYQSKMYKSSEEELKAPRQLAQNRALLGQHWESLKTMMANAIIPLFVKLSEVALGIFEYLQENQQAVQAVFKGISFVVGAILIPILAKATVAALAFIAPFAPFILVVGALGAAFGLLYDDYKTWAEGGKSLFDWGAFRKYIDDSTLSVDNLKNAFSNLGKDMLNNAIPTLKGYAEILDKLVSGDFKGAASQAWDMLKNYYSRAADFVDDLTGQEQGTLANAASNLINPSATPATGNAQASYRSKAFTPEKAASIARVAKNIGVNPNDLAAVISFETGGTFSPSKRNPKSSATGLIQFMAGSGGTKGKYYGMTRDQFGSLSFDEQMKYVEKYFKDRSSRFRAGNEAKNTTGDVYGAVTGYGYKKGSREYNLNKVWDSNKNGIIEKGEMVQNPSFRAHQRKYFDMSNLAAVQQSTRQGDFIDLTKARQNQATANKANEVQVNVGDINIQTSSSTVTGNVQDAMGAIKDQFYQFRNSFN
Physico‐chemical
properties
protein length:676 AA
molecular weight: 73810,73230 Da
isoelectric point:8,75218
aromaticity:0,09172
hydropathy:-0,32027

Domains

Domains [InterPro]
Coil
17–37
Coil Coil G3DSA:1.10.530.10 IPR018247
IPR023346
453–560
IPR023346
YP_009604505.1
1 676
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Acinetobacter phage WCHABP1
[NCBI] 		1983409 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009604505.1 [NCBI]
Genbank nucleotide accession
NC_041966 [NCBI]
CDS location
range 9691 -> 11721
strand -
CDS
ATGGCTGAAAATATTGTTGAGTCGATAATTGTAAAGCTTGGGTTGGACGGCTCACAATATAATCGTGAAGCCGAAAAAGCCAAGTCAAATAATGACAAGCTGAATAAGTCTGTCAGCGAAACCGACAAGATCGTTGGTAACGTAACAAAGACTTTAGCGCGGTGGTTTAGTGTAGCTGCCGCCGCTACTGGCATTCTTAAAATGGTTGATCAGGTGCAAAAGCTTAATGACGAGCTTTATCATCTTGAGCGCAATTTAGGAATGTCAGCAAGCACCATCAAGAACTGGCAAGGCGCTGCTGGTGCAATGGGTGGTTCTGCTCAAGGCATGACTGAATCAATCAAATCCTTGAATATGGGAATGAATGATTTCGTCACAATGGGCGATACTACTCTATTGCCATTTATGAATGCTTTGGGTGTCGGCATGGTCGATGCTCAAGGAAAACTAAGAAAAACTGATGATGTGATGTTAGACCTTGCGGATTCATTCTCCAAAATGGATCGCGAGCAAGCATTTTCTATTGCCTCAAAAATGGGAATTGATGAAGGCACATTCAATACGCTTGTACAGGGGCGTAAAGAAATGGAGAAGATGCTTGAATATCAATCTAAGATGTACAAGTCATCTGAAGAAGAATTAAAAGCACCTCGTCAATTAGCACAAAACCGTGCATTGCTAGGTCAGCATTGGGAATCACTTAAAACAATGATGGCAAATGCTATCATTCCGTTATTTGTGAAGCTTAGTGAAGTTGCGCTTGGTATATTTGAATATCTACAAGAAAACCAGCAAGCCGTTCAAGCAGTATTTAAAGGCATATCTTTTGTAGTTGGCGCTATTCTCATCCCAATTTTGGCAAAGGCTACAGTTGCGGCTTTAGCATTTATTGCTCCATTTGCTCCATTTATTCTAGTTGTAGGTGCTTTAGGTGCGGCATTTGGCTTGCTTTATGACGACTATAAAACTTGGGCAGAAGGTGGCAAGTCCTTGTTCGATTGGGGTGCATTCAGAAAGTATATTGATGATTCGACTTTATCTGTTGATAACTTGAAAAATGCTTTCAGCAATCTAGGCAAAGACATGCTGAACAATGCGATACCAACGCTTAAAGGTTATGCTGAAATTCTTGATAAATTAGTATCTGGTGATTTTAAAGGTGCAGCATCACAAGCTTGGGATATGCTTAAAAACTATTACTCAAGAGCCGCTGATTTTGTTGACGACTTGACTGGTCAAGAACAAGGAACATTGGCTAATGCTGCTAGCAATCTTATAAATCCTAGCGCTACGCCTGCAACTGGAAATGCTCAAGCGTCTTATAGATCAAAAGCATTCACACCAGAAAAAGCCGCTTCTATTGCTCGTGTAGCTAAAAATATTGGGGTTAATCCTAATGATCTGGCTGCTGTTATTTCATTTGAAACTGGTGGAACTTTCAGCCCTAGTAAGAGAAATCCGAAATCTTCTGCAACTGGATTAATTCAGTTCATGGCGGGATCTGGTGGCACTAAAGGAAAATACTATGGCATGACTCGTGACCAATTTGGCTCACTGTCTTTTGATGAACAAATGAAGTATGTCGAAAAGTACTTTAAAGATCGTAGTAGTCGATTTAGGGCTGGCAATGAGGCTAAGAATACTACTGGCGATGTATACGGTGCTGTAACTGGCTACGGATACAAGAAAGGGTCAAGAGAATACAACCTAAACAAAGTATGGGATTCAAACAAGAATGGCATAATCGAAAAAGGTGAAATGGTGCAAAACCCATCATTTAGGGCGCACCAGCGAAAATATTTTGATATGTCAAACTTAGCTGCCGTTCAGCAATCTACTCGTCAAGGTGATTTCATTGATTTAACCAAAGCTAGACAAAACCAAGCAACGGCAAACAAAGCTAATGAAGTCCAAGTAAATGTAGGTGATATTAACATCCAAACATCATCAAGTACCGTTACTGGTAATGTTCAAGATGCAATGGGTGCGATTAAAGACCAATTCTATCAATTCCGAAATTCATTTAATTAG

Tertiary structure

PDB ID
6300f4fba7af32f1f429a63bd1a56f41d14428124efca1ac24e79ff7a9e73e41
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7424
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The complete genome of Acinetobacter baumannii phage WCHABP1 Zhou,W., Feng,Y. and Zong,Z. 2013-06-24 — GenBank