Phage RBP Database

Genbank accession

QDK04283.1 [GenBank]

Protein name

baseplate wedge subunit

RBP type

TF

Evidence UniProt/TrEMBL

Probability 1,00

TSP

Evidence RBPdetect2

Probability 0,59

Protein sequence

MFIQEPKKLIDTGEIGNASTGDILFDGGNKINSDFNAIYNAFGDQRKMAVANGTGADGQIIHATGYYQKHSIAEYATPVKVGTRHDIDTSTVGVKVIIERGELGDCVEFINSNGSISVTNPLTIQAIDSIKGVSGNLVVTSPYSKVTLRCISSDNSTSVWNYSIESMFGQKESPAEGTWNISTSGSVDIPLFHRTEYNMAKLLVTCQSVDGRKIKTAEINILVDTVNSEVISSEYAVMRVGNETEEDEIANIAFSIKENYVTATISSSTVGMRAAVKVIATQKIGVAQ

Physico‐chemical properties

protein length:	288 AA
molecular weight:	30966,42500 Da
isoelectric point:	5,01044
aromaticity:	0,06597
hydropathy:	-0,10972

Domain architecture

QDK04283.1

1 288 aa

ATT 1–272 · STR 273–288

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

IPR036240
STR

IPR036240

IPR008987
ATT

IPR008987 IPR056391

G3DSA:1.20.5.960
Unmapped

G3DSA:1.20.5.960 IPR027411 G3DSA:2.60.40.1680:FF:000001

IPR027412
Unmapped

IPR027412

QDK04283.1

1288 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR036240	STR	IPR036240	1	288	Merged direct domain	Gp9-like superfamily	Central	Low	Positional only	146 proteins / 146 hits
IPR008987	ATT	DC_0752	7	168	InterPro cluster	Baseplate structural protein Gp9/Gp10, N-terminal domain	Central	Medium	Text match	242 proteins / 243 hits
G3DSA:1.20.5.960	Unmapped	-	17	51	Gene3D	Bacteriophage t4 gene product 9 (gp9)	-	-	-	-
IPR027411	Unmapped	-	67	169	InterPro	Baseplate structural protein Gp9/Gp10 middle domain superfamily	-	-	-	-
IPR056391	ATT	DC_0417	169	272	InterPro cluster	Baseplate protein gp9-like, C-terminal	C-terminal	Medium	Text match	98 proteins / 98 hits
G3DSA:2.60.40.1680:FF:000001	Unmapped	-	170	283	FunFam	Baseplate wedge tail fiber connector	-	-	-	-
IPR027412	Unmapped	-	170	283	InterPro	Baseplate structural protein Gp9 C-terminal domain superfamily	-	-	-	-

Proteins with similar domain architecture

Phage

Escherichia phage VEc20 [NCBI] · taxon 2592190

Uroviricota Caudoviricetes Pantevenvirales Tevenvirinae Tequatrovirus

Host

Escherichia coli [NCBI] · taxon 562

cellular organisms Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales

Genbank protein accession

QDK04283.1 [NCBI]

Genbank nucleotide accession

MN022785 [NCBI]

CDS location

range 83687 -> 84553
strand +

CDS

ATGTTCATTCAAGAACCAAAGAAATTGATTGATACCGGCGAAATTGGTAACGCTTCTACTGGTGATATCTTATTCGACGGTGGTAATAAAATTAATAGTGATTTTAACGCAATTTATAATGCGTTTGGCGATCAGCGTAAAATGGCAGTAGCAAATGGCACTGGAGCAGATGGTCAAATTATCCATGCTACTGGGTATTATCAAAAACACTCTATTGCAGAGTATGCAACTCCAGTAAAAGTTGGCACTAGACATGATATTGATACCTCTACTGTAGGTGTTAAAGTTATCATTGAAAGAGGCGAACTCGGCGATTGTGTTGAATTCATTAACTCTAATGGATCAATATCAGTTACTAATCCTTTAACAATTCAAGCTATTGATTCAATTAAAGGTGTTTCAGGTAATTTAGTAGTAACTAGCCCATATAGTAAAGTAACTTTACGCTGTATTTCATCTGATAATTCTACATCGGTTTGGAATTATTCTATTGAAAGTATGTTTGGACAAAAGGAATCACCAGCTGAAGGTACATGGAATATTTCTACATCCGGATCAGTTGATATTCCACTATTTCATCGCACTGAATACAATATGGCTAAATTGTTAGTTACGTGCCAATCGGTAGATGGAAGAAAAATTAAAACGGCAGAAATAAATATTCTTGTAGATACTGTTAATTCAGAGGTTATTTCTTCTGAATATGCTGTCATGCGGGTTGGGAATGAAACCGAAGAAGACGAAATCGCTAATATTGCATTCAGTATTAAAGAAAATTATGTAACGGCGACTATAAGTTCTTCAACTGTCGGTATGAGAGCAGCAGTTAAAGTTATCGCTACGCAGAAAATCGGGGTGGCTCAATAA

Protein

Domains

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)