Protein

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Genbank accession
BDR26709.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MKVLHKGDRGDEVCQLQTLLNLCGYDVGKPDGIFGNNTFNQVVKFQKDNCLDSDGIVGKNTWAELFSKYSPPIPYKTIPMPTANKSRAAATPVMNAVENVTGVRSQLLLTFASIESAFDYEIKAKTSSATGWFQFLTGTWKTMIENYGMKYGVLTDPTGALRKDPRISALMGAELIKENMNILRPVLKREPTDTDLYLAHFFGPGAARRFLTTGQNELAATHFPKEAQANPSIFYNKDGSPKTIQEVYNLMDGKVAAHRK
Physico‐chemical
properties
protein length:260 AA
molecular weight: 28823,65810 Da
isoelectric point:8,96957
aromaticity:0,09615
hydropathy:-0,36077

Domains

Domains [InterPro]
IPR036366
ATT
1–78
IPR036366 G3DSA:1.10.530.10:FF:000045
G3DSA:1.10.101.10:FF:000016
Unmapped
1–70
G3DSA:1.10.101.10:FF:000016 G3DSA:1.10.530.10
IPR036365
RBD
2–73
IPR036365 IPR008258
IPR002477
CBM
9–65
IPR002477 IPR023346
BDR26709.1
1 260
Architecture
ATT
RBD
STR
RBD
ATT 1-78 | RBD 79-97 | STR 98-223 | RBD 224-260
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage sp. LC
[NCBI] 		2972144 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
BDR26709.1 [NCBI]
Genbank nucleotide accession
LC727699 [NCBI]
CDS location
range 279021 -> 279803
strand +
CDS
ATGAAAGTATTACACAAAGGCGATAGGGGTGATGAGGTATGTCAACTCCAGACACTATTAAATCTATGTGGCTATGATGTTGGAAAGCCAGATGGTATTTTTGGAAATAACACCTTTAATCAGGTAGTTAAATTTCAAAAAGATAATTGTCTGGATAGTGATGGTATTGTAGGTAAGAATACTTGGGCTGAATTATTCAGTAAATATTCTCCACCTATTCCTTATAAAACTATCCCTATGCCAACTGCAAATAAATCACGTGCAGCTGCAACTCCAGTTATGAATGCAGTAGAAAATGTTACTGGTGTTCGTAGCCAGTTGCTATTAACATTTGCTTCTATTGAATCAGCATTCGATTACGAAATAAAAGCTAAGACTTCATCAGCTACTGGTTGGTTCCAATTCCTTACTGGAACATGGAAAACAATGATTGAAAATTATGGCATGAAGTATGGCGTACTTACTGATCCAACTGGGGCATTACGTAAAGATCCACGTATAAGTGCTTTAATGGGTGCCGAACTAATTAAAGAGAATATGAATATTCTTCGTCCTGTCCTTAAACGTGAACCAACTGATACTGATCTTTATTTAGCTCACTTCTTTGGGCCTGGTGCAGCCCGTCGTTTCCTGACCACTGGCCAGAATGAATTAGCTGCTACCCATTTCCCAAAAGAAGCTCAGGCAAACCCATCTATTTTTTATAACAAAGATGGGTCACCTAAAACCATTCAAGAAGTTTATAACTTAATGGATGGTAAAGTTGCAGCACATAGAAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
4d2acbefe83bd190e9c8bd0deb1ba9494a2e547ab112a4250b4fad753a634ba7
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9542
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Whole-Genome Sequence of Pseudomonas phage LC Fujiki,J., Nakamura,T., Nakamura,K., Tamamura,K., Ichikawa,N., Ishiguro,Y. and Iwano,H. 2021-07 — GenBank