Protein

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Genbank accession
BDR26709.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MKVLHKGDRGDEVCQLQTLLNLCGYDVGKPDGIFGNNTFNQVVKFQKDNCLDSDGIVGKNTWAELFSKYSPPIPYKTIPMPTANKSRAAATPVMNAVENVTGVRSQLLLTFASIESAFDYEIKAKTSSATGWFQFLTGTWKTMIENYGMKYGVLTDPTGALRKDPRISALMGAELIKENMNILRPVLKREPTDTDLYLAHFFGPGAARRFLTTGQNELAATHFPKEAQANPSIFYNKDGSPKTIQEVYNLMDGKVAAHRK
Physico‐chemical
properties
protein length:260 AA
molecular weight: 28823,65810 Da
isoelectric point:8,96957
aromaticity:0,09615
hydropathy:-0,36077

Domains

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage sp. LC
[NCBI] 		2972144 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
BDR26709.1 [NCBI]
Genbank nucleotide accession
LC727699 [NCBI]
CDS location
range 279021 -> 279803
strand +
CDS
ATGAAAGTATTACACAAAGGCGATAGGGGTGATGAGGTATGTCAACTCCAGACACTATTAAATCTATGTGGCTATGATGTTGGAAAGCCAGATGGTATTTTTGGAAATAACACCTTTAATCAGGTAGTTAAATTTCAAAAAGATAATTGTCTGGATAGTGATGGTATTGTAGGTAAGAATACTTGGGCTGAATTATTCAGTAAATATTCTCCACCTATTCCTTATAAAACTATCCCTATGCCAACTGCAAATAAATCACGTGCAGCTGCAACTCCAGTTATGAATGCAGTAGAAAATGTTACTGGTGTTCGTAGCCAGTTGCTATTAACATTTGCTTCTATTGAATCAGCATTCGATTACGAAATAAAAGCTAAGACTTCATCAGCTACTGGTTGGTTCCAATTCCTTACTGGAACATGGAAAACAATGATTGAAAATTATGGCATGAAGTATGGCGTACTTACTGATCCAACTGGGGCATTACGTAAAGATCCACGTATAAGTGCTTTAATGGGTGCCGAACTAATTAAAGAGAATATGAATATTCTTCGTCCTGTCCTTAAACGTGAACCAACTGATACTGATCTTTATTTAGCTCACTTCTTTGGGCCTGGTGCAGCCCGTCGTTTCCTGACCACTGGCCAGAATGAATTAGCTGCTACCCATTTCCCAAAAGAAGCTCAGGCAAACCCATCTATTTTTTATAACAAAGATGGGTCACCTAAAACCATTCAAGAAGTTTATAACTTAATGGATGGTAAAGTTGCAGCACATAGAAAATAA

Tertiary structure

PDB ID
4d2acbefe83bd190e9c8bd0deb1ba9494a2e547ab112a4250b4fad753a634ba7
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9542
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Whole-Genome Sequence of Pseudomonas phage LC Fujiki,J., Nakamura,T., Nakamura,K., Tamamura,K., Ichikawa,N., Ishiguro,Y. and Iwano,H. 2021-07 — GenBank