Protein

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Genbank accession
URG14291.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MPVSPTKYTKISDLPKKEVMENDQFIINTNDTKLDQTSVASLYDIREGVYFSNAANTIAEGLASVDDDEMFFVYDTAAKFSVLQYMKVRNQASPVIGSDGKQRRFPTYLSMLNVTAISETSGYDIIGKVDNFAALRSIKPTYTGQRVILAGYFSGSSLGSGEFVGYAGTANDDGGTTASGDGFYWKRNKTAFTLEDFGGGQVDDTEAMRASQKAQVGPITLSPGKTYYYSSPVKHYSKAGWIGNGASIVFRGTGNRIPFISSPTTAAGVDNDRANGSTAVVGAIFKDLTIDVNYVDTTGALGFEFGENTLDNWTNCVFTNVTFKNGKFDNLGLQNNSTDNQFIRCTFINAGEDSVTVRGGCLRNEFVECDVVNSAQVAHRDGTFYGDGIVNKGRDTLIKSCRFINIGNGKKGAGIANNAEDTKNADEASNGTYLNNYFINCYGGFGFGTVNPDFIAAGDLIKGIKAIGNVFVNTLRTVIGIRDLYQPVLLDNVILTQTTGNVTTIEITNCTNFQMTGRVTDAAGSAITITSSSGKVDLVADNVSTTKTLNGVVITDSNRITGSIRLINAQRRGCTFSNCNNMDLDLYVESPAQDALEAVGCRYSNLDVKLVNVPEHGMTLNGVVESNIKFNINDAGVKTPSAFYPIRLLGVRNSILSGVSSSANANKPLYDITSDANNVNVLIANSRLGAGTTGKVQVGQGSTITQNNII
Physico‐chemical
properties
protein length:710 AA
molecular weight: 76041,98530 Da
isoelectric point:5,26974
aromaticity:0,08732
hydropathy:-0,18310

Domains

Domains [InterPro]
DC_1164
ATT
5–125
DC_1164 IPR012334 DC_1084
DC_0717
ATT
100–210
DC_0717 IPR012334
IPR011050
STR
198–532
IPR011050
IPR006626
Unmapped
313–335
IPR006626 IPR006626 IPR006626 IPR006626
URG14291.1
1 710
Architecture
ATT
STR
RBD
ATT 5-210 | STR 211-532 | RBD 533-710
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
URG14291.1
1 710
Domain Start End Length (AA) Confidence
N-terminal 1 205 205 0,9948
Central domain 206 699 495 0,9968
C-terminal 700 710 10 0,3298
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-205
Central
206-699
C-terminal
700-710

Taxonomy

  Name Taxonomy ID Lineage
Phage Pectobacterium phage vB_ParM-25
[NCBI] 		2939654 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
URG14291.1 [NCBI]
Genbank nucleotide accession
ON375847.1 [NCBI]
CDS location
range 20249 -> 22381
strand +
CDS
ATGCCAGTATCACCGACGAAATATACTAAGATCTCCGACTTACCTAAAAAGGAAGTTATGGAGAACGATCAGTTTATCATTAATACCAACGACACTAAGCTGGATCAAACGAGCGTAGCTTCTCTCTACGATATTCGTGAGGGCGTCTACTTCAGTAACGCAGCTAACACCATCGCCGAAGGTCTGGCCTCCGTGGACGATGACGAGATGTTCTTTGTCTACGACACTGCAGCTAAGTTCTCTGTCCTTCAGTACATGAAGGTTCGTAACCAGGCATCACCTGTCATTGGTTCCGATGGCAAACAACGCCGTTTCCCTACTTACCTTTCCATGTTGAATGTAACTGCTATCTCGGAAACGTCCGGTTACGACATCATCGGTAAGGTTGACAATTTCGCCGCTCTACGTTCTATCAAACCTACCTACACGGGTCAGCGCGTTATCCTGGCTGGGTATTTCTCTGGTAGCTCTTTGGGATCCGGGGAATTTGTGGGGTACGCAGGGACAGCTAACGATGATGGCGGTACTACTGCCTCAGGCGATGGCTTTTATTGGAAGCGGAACAAGACTGCCTTTACGCTCGAAGATTTCGGCGGTGGCCAGGTAGACGATACTGAAGCAATGCGTGCATCTCAGAAAGCACAAGTAGGCCCTATTACCTTATCTCCAGGTAAAACCTATTATTACTCATCTCCGGTAAAACATTATTCTAAAGCCGGTTGGATTGGTAATGGTGCTTCTATCGTATTCAGAGGGACAGGTAACCGAATTCCGTTTATCTCTTCTCCGACTACAGCTGCTGGAGTTGATAACGATCGCGCAAACGGAAGCACTGCTGTAGTCGGAGCTATTTTTAAAGATCTGACTATTGACGTCAACTATGTCGATACTACGGGCGCATTAGGCTTTGAGTTTGGCGAGAACACGTTGGACAACTGGACGAATTGCGTCTTTACTAACGTGACATTCAAGAACGGTAAGTTCGATAACTTGGGGCTGCAGAATAACTCCACCGATAACCAGTTTATCCGCTGTACTTTCATTAACGCAGGTGAAGACTCGGTTACTGTACGCGGCGGTTGTCTCCGTAATGAGTTTGTTGAATGTGATGTTGTCAATAGCGCACAGGTAGCTCACCGAGACGGAACCTTCTACGGAGACGGTATCGTCAACAAAGGTCGTGATACCTTGATCAAAAGCTGTCGCTTCATCAATATCGGTAATGGTAAGAAAGGCGCAGGTATTGCAAATAACGCTGAAGATACCAAGAACGCCGACGAAGCTAGTAACGGTACTTACCTCAACAACTATTTCATTAACTGTTATGGCGGTTTTGGTTTCGGTACGGTTAACCCAGACTTCATCGCAGCAGGTGATTTGATTAAAGGTATCAAGGCTATCGGAAACGTATTTGTAAATACGCTTCGCACCGTGATAGGTATTCGTGATCTTTACCAACCGGTTCTGTTGGATAACGTTATCCTTACCCAGACCACCGGTAACGTAACCACGATTGAGATTACCAACTGCACCAACTTCCAAATGACCGGTCGTGTTACAGATGCCGCTGGCTCCGCTATTACGATTACGTCTTCCTCGGGTAAAGTTGATTTGGTGGCGGATAATGTCTCCACGACCAAGACACTCAACGGGGTGGTTATTACCGACAGTAATCGGATTACGGGCAGTATCCGTTTGATCAATGCTCAACGCCGCGGCTGTACTTTCTCTAACTGTAACAACATGGACTTAGACCTCTACGTTGAGTCGCCTGCACAGGACGCGCTGGAAGCAGTTGGCTGTCGTTACTCTAACTTAGATGTTAAGTTGGTGAACGTCCCTGAACACGGTATGACATTGAACGGCGTTGTTGAAAGTAATATCAAGTTCAACATCAATGATGCGGGAGTTAAAACTCCATCTGCATTTTATCCGATCCGGTTACTGGGTGTACGTAACAGTATCCTCAGCGGAGTATCGTCTTCGGCTAATGCGAATAAACCACTTTACGATATTACATCCGATGCTAATAACGTAAACGTATTAATCGCCAATAGTCGTCTTGGAGCGGGTACTACGGGTAAAGTACAGGTTGGTCAAGGGTCTACTATTACCCAGAACAATATCATCTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
4e02f7d35a11d841199528fcdd70dfa51ceea8ca421f9be56c53643196242b5d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8392
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50