Phage RBP Database

UniProt accession

A0A8S5LU72 [UniProt]

Protein name

Nucleoid-associated protein

RBP type

TF

Evidence RBPdetect

Probability 0,89

TF

Evidence RBPdetect2

Probability 0,82

Seq2Symm

C3 confidence 0,776

C3	0,776
C1	0,767
D3	0,001

Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).

Protein sequence

MRYLDTPVTIVDDGTDRSLSIKFAEPSLGDTEVVSGVLFRTSHDTSEEIQAKWEPTTGCLNLEIPNNLINYSGYAKIVVPKSSFLSDSITIKFDVYSPKDEDGADRGYTGADKYLFVRDFHTNGDIYVEVGSDVVNTDFLRSVIDKVIANTGLTGKDGVEIDTVALKNDIFNRVTKSIDINKIQNDVLTAVTAKVDAIKEEQSKSLQNQDTKIQAVESKVAGIDVDTIKTNILSEFNTKTEQIKAEIINAVDIPQLKLDLTSLVNSKFTEGKQDIVDSVTSAINTKLQSDEFINPIVQRAIAGVDTHGYADTVKTELNAKIEENTTGISGINTKLEGIEQKLTTAISEAILKSIKDSLTSQDITTILKKDDAYVTTIWDDIVTAGKLDHYLKDSDLRVDEDIDGNRVLYKGHNPLISVRVDTPTASEVGSIRNDVTVLKSRTSDIETKISEIEQQGVGGEGTPGPKGEDGQPGPQGIQGPPGPPGPKGDKGETGERGPKGEDGQPGPVGPQGPPGESATIDTTNFATKPELNQVKSDLTGLQSQVGDVNGRVTTLENKPDPTVEIPSEYKKLNDLYAIFPTYENLVTQMTTNIKNQHLALGIDAVVDEKLRNGGDPFVTTSRMTEAIKAVNGGSGGGTTIVAGNDVDTVFGDGYPYDGDNINTLKNIAIGSVYVDRLRKNGALKWIKTQMYAENANRDQAKTCWRVLFGDTGNVKLPMTGSPLNGAVLTFRRINSTVELTWGGLSWGWFGIKRRGAAGYADHPSDRNKFVTIIPQGGLKEGFIPIGSKLGNMTNDKGVPYGTFYVGGITDSRQVRLQFLNDVPTDRDIVDIRFTTMTYTTDDPWPDQITR

Physico‐chemical properties

protein length:	850 AA
molecular weight:	92314,05540 Da
isoelectric point:	4,82162
aromaticity:	0,06235
hydropathy:	-0,44106

Domain architecture

A0A8S5LU72

1 850 aa

STR 460–538 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

Coil
Unmapped

Coil PTHR24637

IPR008160
STR

IPR008160

G3DSA:1.20.5.320
STR

G3DSA:1.20.5.320

A0A8S5LU72

1850 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_1260
STR

DC_1260

DC_0554
STR

DC_0554

A0A8S5LU72

1850 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
Coil	Unmapped	-	199	219	Coils	Coil	-	-	-	-
PTHR24637	Unmapped	-	458	516	PANTHER	COLLAGEN	-	-	-	-
IPR008160	STR	DC_0536	460	516	InterPro cluster	Collagen triple helix repeat	C-terminal	High	Text match	355 proteins / 386 hits
G3DSA:1.20.5.320	STR	G3DSA:1.20.5.320	488	538	Merged direct domain	G3DSA:1.20.5.320	Central	Low	Positional only	67 proteins / 67 hits

Proteins with similar domain architecture

Phage

Siphoviridae sp. ctKm44 [NCBI] · taxon 2826245

Uroviricota Caudoviricetes

Host No host information

Genbank protein accession

DAD73424.1 [NCBI]

Genbank nucleotide accession

BK014735 [NCBI]

CDS location

range 51174 -> 53726
strand +

CDS

ATGCGATATTTAGACACGCCTGTGACTATCGTCGATGACGGTACAGATCGCAGCTTAAGTATCAAATTTGCTGAACCATCTCTCGGAGACACAGAGGTTGTCTCCGGGGTTTTGTTTAGGACATCTCATGATACTTCAGAGGAAATTCAAGCGAAATGGGAACCTACTACTGGGTGTCTCAACCTTGAAATTCCAAATAATCTAATCAATTATAGCGGTTATGCTAAAATTGTTGTCCCTAAATCATCATTCTTATCCGACTCAATCACAATCAAGTTCGATGTATATTCTCCTAAGGACGAAGACGGAGCTGATCGTGGTTATACTGGTGCGGATAAGTATTTATTTGTCCGTGACTTCCATACAAACGGTGATATTTACGTCGAGGTGGGATCCGATGTAGTTAACACTGATTTTCTACGGAGTGTTATTGACAAAGTTATTGCTAACACTGGACTAACTGGTAAAGATGGGGTTGAAATTGATACTGTCGCTCTTAAGAATGACATTTTCAATCGTGTGACCAAATCCATTGATATTAACAAGATTCAGAATGATGTTCTTACGGCTGTAACAGCTAAGGTCGATGCGATCAAAGAAGAACAATCAAAATCCCTGCAAAATCAGGACACTAAGATTCAAGCCGTCGAATCTAAAGTTGCTGGTATTGACGTGGATACGATTAAGACAAATATCCTAAGTGAGTTCAACACCAAAACAGAGCAAATTAAAGCTGAGATTATCAATGCCGTCGACATTCCTCAGCTTAAATTAGATCTAACATCTTTGGTTAACTCTAAATTCACTGAGGGTAAACAAGATATTGTAGATAGTGTGACATCTGCAATTAACACCAAACTCCAATCTGACGAGTTTATTAATCCGATTGTCCAACGGGCAATTGCTGGGGTGGATACTCATGGATATGCGGATACTGTCAAGACGGAGTTGAACGCTAAGATTGAGGAAAATACTACTGGCATTTCTGGTATCAACACCAAACTAGAAGGTATTGAGCAGAAGCTTACCACAGCTATTTCTGAGGCGATTCTCAAGTCTATTAAAGATAGTCTAACGTCTCAAGATATAACAACTATTCTCAAGAAAGATGACGCTTATGTCACAACCATTTGGGATGATATTGTGACTGCTGGGAAGCTTGATCACTATCTCAAAGATAGTGATTTACGAGTTGATGAAGATATTGATGGTAACCGAGTGTTATATAAGGGTCATAACCCACTTATTTCGGTTAGAGTTGATACTCCTACAGCTTCGGAAGTTGGCTCTATTCGTAACGATGTAACCGTTTTGAAAAGTCGTACAAGTGATATCGAAACGAAAATTTCAGAAATTGAACAGCAAGGCGTTGGTGGTGAAGGTACTCCTGGCCCTAAAGGTGAAGATGGTCAGCCAGGCCCTCAAGGTATCCAAGGCCCGCCCGGCCCTCCAGGCCCTAAGGGTGATAAAGGAGAAACTGGTGAGCGTGGCCCTAAGGGAGAAGATGGACAACCCGGCCCAGTTGGCCCACAAGGCCCTCCTGGAGAATCTGCTACTATTGACACAACTAACTTTGCAACTAAACCAGAACTAAACCAAGTAAAAAGCGACTTGACTGGCTTACAATCTCAAGTTGGTGACGTTAATGGTCGTGTAACAACGCTTGAAAATAAGCCGGATCCTACTGTAGAAATCCCATCAGAATACAAGAAACTAAATGACTTGTACGCTATTTTTCCAACTTACGAAAATCTCGTAACCCAAATGACAACAAATATCAAGAACCAACACTTAGCTCTTGGTATTGATGCGGTGGTTGATGAAAAACTTCGTAATGGTGGAGATCCATTTGTGACTACGTCACGGATGACCGAGGCTATTAAAGCCGTAAATGGTGGATCTGGTGGCGGCACTACAATTGTTGCGGGTAATGATGTGGATACTGTATTCGGTGATGGATATCCTTATGATGGCGATAATATCAACACACTTAAGAATATCGCAATCGGATCTGTATATGTAGATCGACTTCGTAAAAACGGCGCCCTTAAATGGATCAAGACCCAAATGTATGCTGAGAATGCAAACCGTGATCAAGCAAAAACTTGTTGGCGAGTATTATTCGGTGATACTGGAAATGTTAAATTACCAATGACAGGTTCTCCTCTAAACGGTGCAGTATTGACATTCCGTCGTATCAACTCCACTGTCGAATTGACTTGGGGTGGATTGTCATGGGGTTGGTTCGGTATTAAACGAAGAGGAGCTGCTGGATATGCGGATCACCCATCAGACCGTAACAAATTTGTAACCATCATTCCTCAAGGAGGACTTAAAGAAGGGTTTATCCCTATAGGTTCTAAACTGGGAAATATGACAAACGATAAGGGTGTTCCTTACGGTACATTCTACGTTGGTGGTATTACCGATTCTAGACAAGTGCGCTTGCAATTCTTGAACGACGTACCAACAGATCGTGATATTGTAGATATCCGATTTACAACTATGACTTATACCACGGACGATCCGTGGCCAGACCAAATTACTAGATAA

Protein

Domains

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)