Protein

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Genbank accession
UVX29360.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MLQSVKISELPSADTLTEDDLIVVDQPDDTKKATLFQVVSKIEESVENTTLDILSEPDGASKSYSKNSPVSLLLRRSIFEYMTEEDRDTISGTLGIEVIVDYALQNAINDGVSELHFPPVKGIYVLGQTQITLPSGFSMTGVSAKPYTASSNTSFNNRGTVLRLYSGASSIFIMTNRHRFFNIIFDGRDKSVNLMKGVGTDQTQYCRFDSCGVYRWLNGFGGSSSSGYTATLQLIGCAIASNYRGIRNLIDSRITDCNINANDTAGVELNAGANNNSFVNVRNEWNGTYNWFCSGGKRNIVVGELCDRAGTNAFAAVNGGQWIVNGVTVQRSGKNAIAGTADDAHFYIAGAGSVLILSGVYTLVGVNDDGSGNSTPSYILASDSSGTDDKTFIAAGSKLDGYSSTSYIRPGSAIAKTSILGCIGVQDTVNTGFHQVRNGRWHLGDSARNITLPAGVGSTVSMTFPATDSDFAQYSVGFSRSIEIMGRNGTTGSESRFFCKMMIKRESSSAVINPDAQRVESQVDLSGGSWGLSSSSPTGVSVSFAISTDARVITVTLTNVDGAARVVSAELLP
Physico‐chemical
properties
protein length:573 AA
molecular weight: 60978,18940 Da
isoelectric point:5,16345
aromaticity:0,08028
hydropathy:-0,11291

Domains

Domains [InterPro]
DC_1918
ATT
1–283
DC_1918
IPR012334
STR
102–392
IPR012334
DC_0770
STR
232–459
DC_0770
UVX29360.1
1 573
Architecture
ATT
STR
ATT 1-283 | STR 284-459 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UVX29360.1
1 573
Domain Start End Length (AA) Confidence
N-terminal 1 98 98 0,9849
Central domain 99 438 341 0,9819
C-terminal 439 573 134 0,9819
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-98
Central
99-438
C-terminal
439-573

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage VLCpiM5b
[NCBI] 		2951234 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UVX29360.1 [NCBI]
Genbank nucleotide accession
ON602729.1 [NCBI]
CDS location
range 51837 -> 53558
strand -
CDS
ATGCTACAGAGTGTTAAAATTTCAGAGTTGCCAAGTGCGGACACTCTAACAGAAGATGACCTGATCGTAGTTGATCAACCAGATGATACAAAGAAGGCAACTTTATTTCAAGTTGTTTCTAAGATTGAGGAGTCTGTTGAAAATACAACTCTAGATATTCTTTCCGAACCTGATGGTGCCAGTAAATCGTATTCTAAAAATTCTCCTGTTTCATTACTCTTGAGAAGAAGTATATTTGAGTATATGACAGAGGAAGACAGAGATACTATTTCAGGAACATTGGGTATTGAGGTAATTGTAGACTATGCGTTGCAAAATGCCATAAACGATGGGGTTAGTGAGCTACATTTCCCGCCTGTGAAAGGTATTTATGTATTGGGTCAAACTCAAATTACACTGCCCTCTGGCTTCTCTATGACCGGGGTTTCGGCCAAACCGTATACGGCCTCTTCAAATACCTCTTTTAATAATCGAGGGACCGTCTTAAGACTCTACAGTGGTGCTTCTTCAATTTTTATCATGACTAACAGGCATAGATTTTTCAATATCATTTTTGATGGTAGAGATAAGTCAGTAAACCTTATGAAGGGGGTTGGTACAGATCAAACCCAATATTGCCGTTTCGATAGTTGTGGTGTCTATCGTTGGTTAAATGGTTTTGGAGGGTCTAGCTCTTCTGGATATACGGCAACTCTACAGCTTATTGGGTGCGCTATTGCCAGTAATTACCGTGGGATAAGAAATTTAATAGACTCAAGAATAACCGACTGTAATATTAATGCAAATGATACAGCAGGTGTTGAGCTTAATGCAGGAGCAAATAATAATTCATTTGTTAATGTAAGAAATGAGTGGAACGGTACATATAATTGGTTCTGTAGTGGAGGTAAACGTAATATTGTTGTAGGTGAGCTATGCGACCGAGCAGGTACTAATGCTTTCGCTGCTGTTAATGGTGGACAATGGATTGTTAATGGTGTAACAGTTCAGAGATCTGGTAAAAACGCTATTGCCGGAACCGCTGATGACGCACATTTCTACATAGCTGGAGCAGGTTCAGTTTTAATTCTCAGTGGTGTATATACACTTGTGGGAGTAAATGACGATGGTTCAGGAAATTCCACACCATCCTACATATTGGCTAGTGATAGTAGCGGGACTGATGATAAAACATTTATAGCAGCAGGTTCTAAACTCGATGGTTATAGTTCTACTTCTTATATTAGACCCGGAAGTGCTATAGCTAAAACTTCAATATTGGGTTGTATTGGGGTACAAGATACTGTAAATACAGGTTTTCATCAAGTACGTAATGGTCGTTGGCATCTTGGAGACTCTGCCAGGAATATCACACTACCTGCGGGGGTAGGTTCCACGGTATCAATGACATTCCCTGCAACAGACTCAGATTTCGCACAATACTCTGTCGGGTTTAGTAGATCCATAGAGATAATGGGCAGAAATGGAACAACAGGATCAGAATCAAGGTTTTTTTGTAAAATGATGATTAAAAGGGAGTCTTCATCAGCTGTTATTAACCCGGATGCTCAGAGAGTAGAGTCCCAAGTAGATTTAAGCGGGGGATCTTGGGGATTATCTTCCTCTAGTCCTACAGGAGTTTCTGTTTCGTTCGCTATATCTACGGATGCGAGAGTTATAACAGTAACTTTAACCAATGTTGACGGTGCTGCTAGGGTTGTTTCCGCAGAACTATTACCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
1e949e0363f88d0b02771e395d462dacb6086b8b09ce9878bcf9320ff821d8b0
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7904
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genetic determinants of host tropism in Klebsiella phages Beamud,B., Garcia-Gonzalez,N., Gomez-Ortega,M., Gonzalez-Candelas,F., Domingo-Calap,P. and Sanjuan,R. — — GenBank