Protein

Experimentally validated
View in Explore
Genbank accession
BBI58253.1 [GenBank]
Protein name
lysozyme murein hydrolase
RBP type
TF
Evidence RBPdetect2
Probability 0,76
Seq2Symm
C1 confidence 0,916
C1 0,916
C2 0,437
C3 0,000
Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).
Protein sequence
MNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLSVAKSELDKAIGRNCNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRCALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVIATFRTGTWDAYKNL
Physico‐chemical
properties
protein length:164 AA
molecular weight: 18606,23900 Da
isoelectric point:9,59414
aromaticity:0,08537
hydropathy:-0,36829

Taxonomy

Phage
Shigella phage SfPhi01 [NCBI] · taxon 2518961
Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes
Host
Shigella flexneri [NCBI] · taxon 623
cellular organisms Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales

Coding sequence (CDS)

Genbank protein accession
BBI58253.1 [NCBI]
Genbank nucleotide accession
LC465543 [NCBI]
CDS location
range 84778 -> 85272
strand -
CDS
ATGAATATATTTGAAATGTTACGTATAGATGAAGGTCTTAGACTCAAAATCTATAAAGACACAGAAGGCTATTACACTATTGGCATTGGTCATTTGCTTACTAAAAGTCCATCACTAAGTGTTGCTAAATCTGAATTAGATAAAGCTATTGGGCGTAATTGTAATGGTGTAATTACAAAAGATGAGGCCGAAAAACTCTTTAATCAGGATGTTGATGCTGCTGTTCGCGGAATTCTGAGAAATGCTAAATTAAAACCAGTTTATGATTCTCTTGATGCTGTTCGCCGCTGTGCATTGATTAACATGGTCTTCCAAATGGGGGAAACCGGCGTAGCAGGATTTACTAATTCTTTACGCATGCTCCAGCAAAAACGCTGGGATGAAGCAGCAGTTAACTTAGCTAAAAGTAGATGGTATAATCAAACACCTAATCGCGCAAAACGAGTCATTGCAACGTTTAGAACTGGCACTTGGGACGCGTATAAAAATCTATAA

Genome Context

Tertiary structure

BBI58253.1
1 / 4
Structure ID
Source
Method
Resolution
Oligomeric state

Experimental validation

Experimentally validated

A wet-lab result is recorded for this protein, or for its sequence: a solved structure, an experimental GO annotation, a UniProt ECO:0000269 assertion, or a GenBank /experiment= qualifier.

Tier Source Assay Claim Reference
Experimentally validated PDB
8GTG
 structure:X-ray — ECO:0000006
Experimentally validated PDB
4Z9G
 structure:X-ray — ECO:0000006
Experimentally validated PDB
8GTM
 structure:X-ray — ECO:0000006
Experimentally validated PDB
8GTI
 structure:X-ray — ECO:0000006
Validated by sequence identity UniProt
C3V2B5
 protein_existence:evidence_at_protein_level 1: Evidence at protein level —
Validated by sequence identity UniProt
A0A346FJK3
 protein_existence:evidence_at_protein_level 1: Evidence at protein level —

Rows marked “Validated by sequence identity” come from a different entry carrying the same sequence — the experiment was not performed on this protein.