Protein

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Genbank accession
ALM63357.1 [GenBank]
Protein name
neck passage structure
RBP type
TF
Evidence RBPdetect2
Probability 0,73
Seq2Symm
C3 confidence 0,980
C3 0,980
C1 0,497
I 0,001
Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).
Protein sequence
MSLDNFRNRTIIWDTVNKDFPQPIQAMQGDVNARTLLIKIVDNGTEVDLTGHSLKLTYHYTNSSNSGLVMIPPKDLAKGEFILVIPTEMTATGVIEANLILLNKDKEQVIVSKKLTFISDSSTVSDLAQKINNNIDDFTKLLLEKMPQVLRSELSDLHAQTESNKSNIELKANLADMTSLQSAMTELKKEVEAFGISPENLVTIKSLLDAIARNASESEVAELINSVKGLTSNISLMSNGDYSPKANQTDLESLQHTVNDHSATISAKANQTDLDNLQAKVSQTESEAKNAMAKATEAQANSLPLNGNAVSASKLATARKLGVNLQSSSFQDFDGTADATNIGVSGVLPIANGGTGNAYGLSTGISYLSGITSLLSIAVPTIFSTNQLIQWTTVVGNSTKNTPVSGHTFTGIVFTQYTSGGQGRLDYLMKDQVSGSWYSGTGISVVYSAKNNITTITAQSLSWKKIIGIDDFPTGTVRQTTTSSTPTFGGTWTQIGTQVIGSKTIYYWERTA
Physico‐chemical
properties
protein length:512 AA
molecular weight: 55001,15800 Da
isoelectric point:5,40126
aromaticity:0,05859
hydropathy:-0,19199

Taxonomy

Phage
Lactococcus phage 936 group phage PhiD.18 [NCBI] · taxon 1636575
Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes
Host
Lactococcus lactis [NCBI] · taxon 1358
cellular organisms Bacteria Bacillati Bacillota Bacilli Lactobacillales

Coding sequence (CDS)

Genbank protein accession
ALM63357.1 [NCBI]
Genbank nucleotide accession
KP793107 [NCBI]
CDS location
range 6869 -> 8407
strand +
CDS
ATGAGTTTAGATAATTTTAGAAATAGAACAATTATATGGGATACGGTTAATAAAGATTTCCCTCAACCAATACAAGCAATGCAAGGCGATGTCAATGCTAGAACGTTATTAATTAAAATAGTTGATAACGGAACTGAAGTTGATTTAACTGGTCATTCATTAAAACTTACATATCACTACACTAATAGTAGTAATTCTGGTCTTGTTATGATTCCTCCTAAGGACTTAGCTAAGGGAGAATTTATTTTGGTAATTCCTACCGAAATGACAGCGACAGGAGTTATTGAAGCGAACTTAATACTTCTCAATAAAGACAAAGAGCAAGTTATTGTCAGTAAGAAGCTTACATTTATATCAGACAGTTCTACTGTTTCTGATTTAGCTCAAAAAATAAATAATAATATTGATGATTTTACGAAATTATTATTAGAAAAAATGCCACAAGTACTGCGTAGTGAGTTGAGTGATTTACATGCTCAAACTGAATCAAACAAGAGCAATATTGAACTTAAAGCAAATTTAGCTGATATGACGAGCTTACAAAGTGCAATGACAGAGCTTAAAAAAGAAGTAGAAGCATTTGGCATTAGTCCTGAAAATTTAGTTACTATAAAATCGCTATTAGACGCAATTGCAAGAAATGCAAGTGAATCGGAAGTAGCAGAACTAATAAATTCAGTAAAGGGTTTAACAAGTAACATTTCTCTGATGAGTAACGGAGATTACTCCCCTAAAGCTAATCAAACGGATTTAGAAAGTTTACAGCATACTGTTAATGACCATTCGGCAACCATTTCAGCAAAAGCCAATCAAACGGATTTAGACAACTTACAAGCAAAGGTAAGTCAAACTGAAAGTGAAGCCAAAAATGCAATGGCAAAGGCTACCGAAGCACAAGCGAACAGTTTACCACTTAATGGCAATGCGGTCAGTGCAAGCAAATTGGCAACAGCTAGAAAACTCGGAGTAAATCTTCAATCTTCATCATTTCAAGACTTTGACGGGACTGCTGATGCAACTAATATTGGAGTTTCAGGTGTGCTTCCAATCGCAAATGGAGGTACTGGTAATGCTTACGGATTATCTACTGGCATTTCATACTTATCTGGAATAACTTCATTACTTTCGATAGCAGTTCCTACGATTTTCTCTACTAATCAATTAATTCAATGGACAACCGTTGTCGGAAATTCTACAAAAAATACACCTGTTAGCGGTCATACCTTCACTGGTATAGTATTCACTCAATATACATCTGGTGGTCAAGGGAGACTTGATTATTTAATGAAAGACCAAGTCAGTGGTTCATGGTACAGCGGTACAGGAATTTCAGTAGTATATTCCGCAAAAAATAATATAACTACTATTACGGCTCAATCTCTATCATGGAAGAAAATTATTGGCATAGATGACTTTCCAACTGGTACTGTAAGGCAAACTACAACTTCATCTACTCCAACATTTGGTGGCACTTGGACGCAAATTGGAACACAAGTTATCGGCAGTAAAACAATATATTATTGGGAACGTACTGCATAA

Genome Context

Tertiary structure

ALM63357.1
ESMFold2 structure
Source ESMFold2
pLDDT 70.3
Oligomeric state monomer
Download structure