Phage RBP Database

Genbank accession

UJQ86333.1 [GenBank]

Protein name

tail spike protein

RBP type

TF

Evidence Phold

Probability 1,00

TSP

Evidence DepoScope

Probability 1,00

TSP

Evidence RBPdetect

Probability 0,91

TSP

Evidence RBPdetect2

Probability 0,98

Protein sequence

MANVWYIGEAQERRLTLGGQEYSWNIWNGWSIPESAFTAGQLAELDADPGFLLGQSGPRVNPPWTPDPSVGRNDTLLQKIIDIYNEIPGRLGKAALDATYARAVPKVWSVDPAVAGAGYTPTQRTAYFHDLCSQITAAGGSNVIEFPALEFVVAIEGTTPSLSGSTKLFTVPSGTSLHFRPGTKFTVADASAASSNLVLLWQFGASTDPAANFTVRDAAFYGKSKANGKSFWAAGNRRDTPAAKIDNVIYENCLFDDITVGVTNARRNPGGSLGANRDSNWRVINCDFNISNNRAIELSQTNGALIQGNVFTDVESAIHLLIYTENVKCRDNRGTCRTSGIHINAHVHNCEFDGGRFDFVAGQQANYGTMHFHTEPNIASYETSDLTIRNHWFGCPDTGSNRKSLTFMSTQECESARINRIKFFGCEFEGDVNVTPFYTKPGHEMADWVFTDCDFYGNFSNVASSTHNIHDWRFINCRFHSTTGQVINADRMFFRNCEFVAVPTIAASASQVEMVNCTTPGAVVDNGAGSIVTGTVVRTGPKINPATLSGATVWDADDLTAGAVTTWAPKSGGVQSAAFGVVGGAPTVLDAAINGHKSVQFTAASSQRLLTSTFGTSVPQPSTLMLLWKSNDTAADQHLLSGGTLNQPVIRKTSGGQLAYRANAAGKPIQPAVSFTHGQWHATIAVFNGANSRVYTDTLSPQSGTLTEVEALTALRLGSSGTGNSPFLDGEVQMVGLINRAATTEECAGIMRWLTARVGWDVA

Physico‐chemical properties

protein length:	763 AA
molecular weight:	81931,43280 Da
isoelectric point:	5,87752
aromaticity:	0,09436
hydropathy:	-0,17457

Domain architecture

UJQ86333.1

1 763 aa

STR 121–484 · STR 595–760 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

IPR012334
STR

IPR012334 G3DSA:2.60.120.200

IPR011050
STR

IPR011050 IPR013320

PF13385
LEC

PF13385

UJQ86333.1

1763 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_0328
STR

DC_0328 DC_0797

UJQ86333.1

1763 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR012334	STR	IPR012334	121	405	Merged direct domain	Pectin lyase fold	Central	Low	Positional only	867 proteins / 867 hits
IPR011050	STR	IPR011050	169	484	Merged direct domain	Pectin lyase fold/virulence factor	Central	Low	Positional only	572 proteins / 572 hits
G3DSA:2.60.120.200	STR	G3DSA:2.60.120.200	595	760	Merged direct domain	G3DSA:2.60.120.200	Central	Low	Positional only	153 proteins / 153 hits
IPR013320	STR	IPR013320	599	752	Merged direct domain	Concanavalin A-like lectin/glucanase domain superfamily	Central	Low	Positional only	237 proteins / 237 hits
PF13385	LEC	DC_0004	632	746	InterPro cluster	PF13385	C-terminal	Medium	Text match	334 proteins / 417 hits

Proteins with similar domain architecture

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout

UJQ86333.1

1 763 aa

Domain	Start	End	Length (AA)	Confidence
N-terminal	1	121	121	0,9810
Central domain	122	553	433	0,9809
C-terminal	554	763	209	0,9879

N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Phage

Gordonia phage Wojtek [NCBI] · taxon 2910758

No lineage information

Host No host information

Genbank protein accession

UJQ86333.1 [NCBI]

Genbank nucleotide accession

OL455890.1 [NCBI]

CDS location

range 3335 -> 5626
strand +

CDS

ATGGCAAACGTTTGGTATATCGGAGAGGCCCAAGAGCGCCGCCTCACCCTCGGTGGCCAGGAATACTCCTGGAACATCTGGAACGGTTGGAGCATTCCGGAATCTGCATTCACAGCGGGGCAATTAGCTGAGCTGGATGCCGACCCCGGATTCTTATTGGGCCAAAGCGGGCCTCGTGTTAATCCTCCGTGGACACCTGACCCTTCTGTGGGGCGCAATGATACTCTTCTTCAGAAGATCATTGATATTTATAATGAGATTCCCGGTCGGTTAGGTAAAGCGGCACTCGACGCCACATATGCCCGGGCGGTGCCGAAGGTGTGGTCCGTCGATCCCGCCGTCGCAGGGGCCGGATATACCCCTACGCAGCGCACCGCCTACTTCCACGACCTGTGCTCCCAGATCACCGCAGCGGGCGGATCGAACGTCATCGAGTTCCCCGCTCTTGAGTTTGTCGTGGCGATCGAGGGGACAACCCCTTCGCTCTCCGGCTCCACAAAGCTGTTCACCGTCCCATCCGGAACCAGCCTGCACTTCCGGCCCGGAACGAAGTTCACCGTTGCCGACGCATCCGCAGCATCCAGCAATCTCGTGCTCCTGTGGCAGTTCGGGGCCTCCACTGATCCCGCAGCCAACTTCACCGTCCGAGACGCGGCGTTCTACGGAAAGTCCAAGGCGAACGGCAAGTCATTCTGGGCGGCAGGAAACAGGCGTGATACCCCCGCCGCGAAGATCGACAACGTTATCTACGAAAACTGCCTGTTCGATGACATCACAGTCGGCGTCACCAACGCCCGACGCAACCCCGGAGGAAGCCTCGGCGCGAACAGAGACTCCAACTGGCGGGTCATCAACTGCGACTTCAATATCTCGAACAACCGTGCCATCGAACTGTCCCAGACCAACGGGGCACTGATCCAAGGCAACGTGTTCACCGACGTCGAATCCGCGATCCACCTGCTGATCTATACCGAAAACGTCAAGTGCCGCGACAACCGCGGCACTTGTCGAACATCGGGAATCCACATCAACGCGCATGTGCATAACTGCGAGTTCGACGGTGGACGGTTCGACTTCGTGGCAGGTCAGCAGGCCAACTACGGAACGATGCACTTCCACACAGAACCGAATATCGCCAGCTATGAGACGTCGGACTTGACGATTCGGAACCACTGGTTCGGATGCCCCGATACCGGCTCGAACCGCAAGTCGCTGACGTTCATGTCCACACAGGAATGTGAGTCGGCGCGCATCAACCGCATCAAGTTCTTCGGATGCGAGTTCGAAGGCGACGTGAACGTGACCCCGTTCTACACCAAGCCGGGTCACGAGATGGCCGACTGGGTGTTCACCGACTGCGACTTCTACGGCAACTTCTCCAACGTCGCATCCTCGACACACAACATCCACGACTGGCGGTTCATCAACTGCCGTTTCCATTCGACCACCGGGCAGGTCATCAATGCCGATCGCATGTTCTTCCGGAACTGCGAGTTCGTGGCGGTGCCCACCATCGCAGCGAGTGCCAGCCAGGTCGAGATGGTCAACTGCACCACTCCGGGCGCTGTGGTCGACAACGGCGCCGGGTCGATTGTGACCGGCACTGTTGTTCGCACGGGGCCGAAGATCAACCCCGCTACACTCTCGGGCGCGACAGTGTGGGATGCCGACGATCTCACGGCAGGAGCGGTCACTACCTGGGCACCGAAGAGCGGCGGTGTTCAGTCGGCGGCATTCGGCGTTGTCGGCGGCGCACCGACTGTGTTGGATGCGGCGATCAACGGCCACAAGTCGGTGCAGTTCACGGCGGCCTCGTCGCAGCGCCTGTTGACGTCCACGTTTGGCACCTCGGTACCTCAGCCGTCCACTCTGATGCTGTTGTGGAAGTCGAACGATACGGCAGCCGATCAGCACCTGTTGTCGGGTGGGACGTTGAATCAGCCTGTGATCCGTAAGACGTCGGGTGGGCAGTTGGCGTATCGGGCCAACGCTGCGGGGAAGCCGATACAGCCAGCAGTGAGCTTCACTCATGGGCAATGGCACGCCACGATTGCCGTGTTCAATGGCGCGAACTCTCGGGTGTATACGGACACGCTCTCGCCGCAGTCGGGCACCTTGACGGAGGTTGAGGCGCTCACTGCGCTGCGTCTCGGTTCGTCGGGAACAGGTAACTCTCCGTTCCTTGACGGTGAGGTCCAGATGGTCGGTTTGATCAATCGGGCGGCGACGACGGAGGAGTGTGCGGGCATCATGCGATGGCTGACCGCTCGCGTCGGCTGGGACGTCGCCTGA

Protein

Domains

Tail Spike Domain Segmentation

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)