Protein

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Genbank accession
QDH50553.1 [GenBank]
Protein name
tail fiber-like protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,98
Seq2Symm
C3 confidence 0,998
C3 0,998
C1 0,130
D3 0,030
Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).
Protein sequence
MSLLRADKIANRFNNTGPIIVGPSTVSGHFTVTGIATVLGLGVTNNVLVGNALTANYITANNGANLFNSNLTGITTAGIVTGATYYGDGVNLSGVVTSVVPGAGVQISPLSGQGRVTISATGVAVAGYATNAGLATDVKGGVAGAVLYQIGPNDTGFTAAGSAGEILQSNGALAPTWTSLAAINVAYADSAGISTNLKGGSAGRIPVQDGLNSTTFMPVGVTGNIILAQGTSTPIYIDPKAQLDVRRARFAGIATNLQSGYISSATSLEVIGVTTLGVATAKTLNVTGITTTHDLRVTGVATISQLQIGEEGALVGITTILDEDDMVSNRADALATQQSIRAYVDATRTGIGMTFDADTGGGTIDLDEETFTIKGTTNEIYTIGLGNTVTVGLDTNVTVPNNLVVSGLTSLSGLTTITGQLGVTGITTTQFLDVTGVGTVQTLGVTGVATAQFLEVTGVSTIATLGVSGVTTTQFLQVTGVSTFQGDVTLGAGVTVFNGDFENSNLD
Physico‐chemical
properties
protein length:507 AA
molecular weight: 50817,29910 Da
isoelectric point:4,33991
aromaticity:0,04931
hydropathy:0,34714

Taxonomy

Phage
Synechococcus phage S-B43 [NCBI] · taxon 2484638
Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes
Host
Synechococcus sp. MW02 [NCBI] · taxon 1620844
Cyanobacteriota Cyanophyceae Synechococcales Synechococcaceae Synechococcus

Coding sequence (CDS)

Genbank protein accession
QDH50553.1 [NCBI]
Genbank nucleotide accession
MN018232.1 [NCBI]
CDS location
range 89114 -> 90637
strand +
CDS
ATGTCATTACTTAGGGCCGACAAGATTGCCAATAGGTTTAATAATACTGGTCCTATTATTGTAGGTCCATCGACTGTTAGTGGACATTTTACAGTCACTGGTATTGCAACTGTCCTTGGTCTTGGTGTTACAAATAACGTTTTAGTTGGTAATGCACTGACTGCCAACTATATCACCGCCAATAACGGTGCAAATCTTTTCAACTCAAATCTTACTGGCATTACGACCGCTGGTATCGTCACTGGTGCGACTTATTACGGTGACGGTGTTAATTTAAGTGGTGTAGTTACATCAGTTGTTCCTGGTGCTGGTGTTCAAATCAGTCCTTTATCTGGTCAAGGTAGAGTTACAATTTCTGCAACTGGTGTGGCGGTTGCTGGATACGCAACTAACGCTGGTCTTGCAACTGATGTCAAAGGTGGTGTTGCTGGTGCAGTTCTGTATCAGATTGGACCAAATGATACTGGATTCACTGCAGCTGGTTCTGCAGGCGAAATTCTTCAGTCAAACGGTGCTTTAGCACCAACTTGGACATCTCTTGCTGCAATTAACGTAGCATATGCCGATAGTGCTGGTATCTCAACCAACTTAAAAGGTGGTTCTGCTGGTAGAATTCCAGTTCAGGATGGATTAAACTCCACCACATTTATGCCTGTCGGTGTTACAGGTAATATTATTCTTGCTCAGGGTACATCAACTCCAATTTATATTGACCCTAAGGCTCAACTTGATGTAAGAAGAGCAAGATTTGCTGGTATTGCAACCAATCTTCAAAGTGGTTACATCTCATCCGCAACTTCATTGGAAGTTATTGGTGTCACCACACTGGGTGTTGCCACTGCAAAGACATTAAATGTTACTGGTATCACCACTACTCACGACTTAAGAGTAACTGGTGTTGCTACAATCAGTCAATTACAGATTGGTGAAGAGGGTGCATTAGTTGGTATCACCACTATTCTCGATGAGGATGATATGGTGTCAAACAGAGCTGATGCTCTGGCGACACAACAATCTATTCGTGCTTATGTAGACGCGACTAGAACTGGTATCGGAATGACCTTCGATGCCGACACTGGTGGTGGCACCATTGACCTTGATGAAGAGACCTTCACAATCAAAGGTACTACAAACGAGATTTATACAATCGGTCTTGGTAATACAGTCACAGTTGGTCTGGATACTAACGTTACTGTACCAAACAACCTGGTAGTTTCTGGTCTCACATCACTGTCTGGTCTGACTACTATCACTGGACAGTTAGGTGTTACAGGTATCACCACCACACAGTTCTTAGATGTCACTGGTGTTGGTACAGTTCAAACTCTGGGTGTCACTGGAGTTGCAACTGCACAGTTCCTTGAAGTCACTGGCGTATCAACGATTGCAACACTGGGTGTCAGTGGAGTCACCACAACTCAGTTCTTGCAAGTCACTGGTGTTTCTACATTCCAAGGTGATGTAACTCTGGGTGCTGGTGTTACCGTATTTAATGGAGATTTTGAAAATTCAAATCTGGACTAA

Genome Context

Tertiary structure

QDH50553.1
ESMFold structure
Source ESMFold
pLDDT 62.7
Oligomeric state monomer
Download structure

Literature

Title Authors Date PMID Source
Isolation, characterization and genome sequencing of the novel cyanophage S-B43 from the Bohai Sea, China Wang,M. 2020-10 — GenBank