Protein

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Genbank accession
QDH50553.1 [GenBank]
Protein name
tail fiber-like protein
RBP type
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,92
Protein sequence
MSLLRADKIANRFNNTGPIIVGPSTVSGHFTVTGIATVLGLGVTNNVLVGNALTANYITANNGANLFNSNLTGITTAGIVTGATYYGDGVNLSGVVTSVVPGAGVQISPLSGQGRVTISATGVAVAGYATNAGLATDVKGGVAGAVLYQIGPNDTGFTAAGSAGEILQSNGALAPTWTSLAAINVAYADSAGISTNLKGGSAGRIPVQDGLNSTTFMPVGVTGNIILAQGTSTPIYIDPKAQLDVRRARFAGIATNLQSGYISSATSLEVIGVTTLGVATAKTLNVTGITTTHDLRVTGVATISQLQIGEEGALVGITTILDEDDMVSNRADALATQQSIRAYVDATRTGIGMTFDADTGGGTIDLDEETFTIKGTTNEIYTIGLGNTVTVGLDTNVTVPNNLVVSGLTSLSGLTTITGQLGVTGITTTQFLDVTGVGTVQTLGVTGVATAQFLEVTGVSTIATLGVSGVTTTQFLQVTGVSTFQGDVTLGAGVTVFNGDFENSNLD
Physico‐chemical
properties
protein length:507 AA
molecular weight: 50817,29910 Da
isoelectric point:4,33991
aromaticity:0,04931
hydropathy:0,34714

Domains

Domains [InterPro]

No domain annotations available.

Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-B43
[NCBI] 		2484638 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QDH50553.1 [NCBI]
Genbank nucleotide accession
MN018232.1 [NCBI]
CDS location
range 89114 -> 90637
strand +
CDS
ATGTCATTACTTAGGGCCGACAAGATTGCCAATAGGTTTAATAATACTGGTCCTATTATTGTAGGTCCATCGACTGTTAGTGGACATTTTACAGTCACTGGTATTGCAACTGTCCTTGGTCTTGGTGTTACAAATAACGTTTTAGTTGGTAATGCACTGACTGCCAACTATATCACCGCCAATAACGGTGCAAATCTTTTCAACTCAAATCTTACTGGCATTACGACCGCTGGTATCGTCACTGGTGCGACTTATTACGGTGACGGTGTTAATTTAAGTGGTGTAGTTACATCAGTTGTTCCTGGTGCTGGTGTTCAAATCAGTCCTTTATCTGGTCAAGGTAGAGTTACAATTTCTGCAACTGGTGTGGCGGTTGCTGGATACGCAACTAACGCTGGTCTTGCAACTGATGTCAAAGGTGGTGTTGCTGGTGCAGTTCTGTATCAGATTGGACCAAATGATACTGGATTCACTGCAGCTGGTTCTGCAGGCGAAATTCTTCAGTCAAACGGTGCTTTAGCACCAACTTGGACATCTCTTGCTGCAATTAACGTAGCATATGCCGATAGTGCTGGTATCTCAACCAACTTAAAAGGTGGTTCTGCTGGTAGAATTCCAGTTCAGGATGGATTAAACTCCACCACATTTATGCCTGTCGGTGTTACAGGTAATATTATTCTTGCTCAGGGTACATCAACTCCAATTTATATTGACCCTAAGGCTCAACTTGATGTAAGAAGAGCAAGATTTGCTGGTATTGCAACCAATCTTCAAAGTGGTTACATCTCATCCGCAACTTCATTGGAAGTTATTGGTGTCACCACACTGGGTGTTGCCACTGCAAAGACATTAAATGTTACTGGTATCACCACTACTCACGACTTAAGAGTAACTGGTGTTGCTACAATCAGTCAATTACAGATTGGTGAAGAGGGTGCATTAGTTGGTATCACCACTATTCTCGATGAGGATGATATGGTGTCAAACAGAGCTGATGCTCTGGCGACACAACAATCTATTCGTGCTTATGTAGACGCGACTAGAACTGGTATCGGAATGACCTTCGATGCCGACACTGGTGGTGGCACCATTGACCTTGATGAAGAGACCTTCACAATCAAAGGTACTACAAACGAGATTTATACAATCGGTCTTGGTAATACAGTCACAGTTGGTCTGGATACTAACGTTACTGTACCAAACAACCTGGTAGTTTCTGGTCTCACATCACTGTCTGGTCTGACTACTATCACTGGACAGTTAGGTGTTACAGGTATCACCACCACACAGTTCTTAGATGTCACTGGTGTTGGTACAGTTCAAACTCTGGGTGTCACTGGAGTTGCAACTGCACAGTTCCTTGAAGTCACTGGCGTATCAACGATTGCAACACTGGGTGTCAGTGGAGTCACCACAACTCAGTTCTTGCAAGTCACTGGTGTTTCTACATTCCAAGGTGATGTAACTCTGGGTGCTGGTGTTACCGTATTTAATGGAGATTTTGAAAATTCAAATCTGGACTAA

Tertiary structure

PDB ID
b494ee4a1edb096f7c43f2a61bedf856ac111a9260457837c70fe2e8e622ea15
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6266
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation, characterization and genome sequencing of the novel cyanophage S-B43 from the Bohai Sea, China Wang,M. 2020-10 — GenBank