Protein

View in Explore
Genbank accession
UYD58364.1 [GenBank]
Protein name
short tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MVENNIKLHISDSADSVLFSGAGWPAAVKTVGDALNRIGPWAITDNGLPLATTENAGVIRIATQSEMTVGTSTNTAITPALLKLAMQTPQATDTVVGNTRYATNAEALALAMNSAAITPAKLGHVFANKGATETARGTMRISTVAQARSGTDDTTSMTPLKTKLAIEALSQAWGPATEAARGVVQMSTVAQALQGTLRDGFAISPYTLSKMAGTENAAGMFKVATDSQALALVDNTVAMTPYKVGRLVASPTQRGLVQITAGPNFQPGVALAASSPVLYTTGGTMTGNITFNQNWQGVMWSRNTDYAHIIFKNDSNADTDSFLEFKVSDDHNEYFRWNISENIAGTLRNGGHMWLAGNIDVNDFYIRSDKRLKHGFKPIENALDKLDFLHPGTYHKQYSLDNDDIVGVEAGMYAQDFQKAMPEGVKSLSDGTLTISPSAQTAFLTQVVKELKEQVIDLQNSIAKLKGEKND
Physico‐chemical
properties
protein length:471 AA
molecular weight: 50385,21220 Da
isoelectric point:5,80340
aromaticity:0,06794
hydropathy:-0,19151

Domains

Domains [InterPro]
DC_0176
STR
1–420
DC_0176 Coil
IPR030392
CHP
368–462
IPR030392
IPR030392
CHP
368–426
IPR030392
DC_0227
RBD
404–471
DC_0227
UYD58364.1
1 471
Architecture
STR
RBD
STR 1-420 | RBD 421-471
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Aeromonas phage avDM14-QBC
[NCBI] 		3101599 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Aeromonas hydrophila
[NCBI] 		644 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Aeromonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UYD58364.1 [NCBI]
Genbank nucleotide accession
OP380598.1 [NCBI]
CDS location
range 17087 -> 18502
strand +
CDS
ATGGTTGAAAATAACATCAAACTTCATATTTCGGATTCAGCGGATTCAGTTCTTTTTTCCGGGGCTGGCTGGCCAGCTGCCGTTAAAACTGTAGGTGATGCGTTAAATCGCATAGGTCCATGGGCAATAACAGATAATGGTTTACCGCTGGCCACCACTGAGAATGCCGGGGTTATTCGGATTGCTACCCAATCTGAAATGACCGTCGGGACCAGCACAAATACAGCAATTACGCCTGCACTGTTGAAACTGGCGATGCAAACGCCACAAGCTACCGACACAGTGGTTGGTAACACCCGATACGCGACGAATGCTGAAGCGCTTGCACTTGCAATGAATTCAGCCGCAATCACTCCTGCTAAATTAGGACATGTTTTTGCAAATAAGGGTGCTACCGAAACTGCTCGCGGAACAATGCGAATTTCGACCGTAGCGCAGGCCCGATCGGGAACTGATGACACCACGTCAATGACACCATTGAAGACAAAACTGGCGATCGAGGCTTTGAGCCAAGCATGGGGTCCAGCGACGGAAGCGGCTCGCGGTGTTGTTCAAATGTCAACCGTAGCCCAAGCTTTGCAGGGAACATTGCGTGATGGATTCGCTATTAGTCCTTACACCCTGTCTAAAATGGCCGGTACCGAAAACGCCGCCGGTATGTTTAAAGTCGCAACAGATTCGCAAGCATTAGCGCTTGTTGATAACACTGTCGCGATGACGCCATATAAAGTTGGTCGATTAGTAGCTTCGCCAACGCAACGCGGTCTTGTCCAAATTACAGCTGGTCCTAATTTCCAACCAGGTGTCGCATTAGCGGCTAGTTCGCCGGTGCTTTACACGACTGGCGGCACGATGACTGGAAATATCACCTTCAACCAAAACTGGCAAGGTGTCATGTGGTCGAGAAATACCGACTATGCGCATATAATTTTCAAAAATGACAGCAATGCCGATACTGATTCATTTCTTGAATTTAAGGTAAGCGATGATCATAACGAGTATTTCCGTTGGAATATTTCGGAAAATATCGCCGGCACGTTGCGAAATGGCGGCCATATGTGGCTTGCTGGAAATATCGACGTTAACGACTTTTATATCCGTTCCGATAAACGTCTTAAGCATGGGTTCAAACCTATTGAAAATGCTCTCGACAAACTTGATTTTCTGCACCCCGGCACATATCACAAACAATATTCGTTAGATAATGACGACATTGTAGGTGTTGAAGCTGGTATGTATGCTCAAGATTTCCAGAAAGCAATGCCTGAAGGTGTTAAATCTTTGAGCGACGGCACCCTGACTATTTCTCCTTCCGCGCAAACTGCCTTCTTAACACAGGTTGTTAAGGAATTGAAAGAACAAGTTATCGATTTACAAAATTCCATCGCAAAACTCAAAGGGGAAAAGAATGATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
559d47050d08d1de0be9420c8f9a77cdc8116f8a9f46493eb3e4a969064fbe84
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7652
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
On Diversity and Genetic Richness: Insights on Aeromonad Phage Diversity through Physicochemical and Molecular Analysis Papa,D.M., Rousseau,G., Tremblay,D., Labrie,S., Gutierrez,T.A., Ramos,J.D. and Moineau,S. 2024-03-24 — GenBank