Protein

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Genbank accession
YAF80486.1 [GenBank]
Protein name
major tail protein
RBP type
TSP
Evidence RBPdetect
Probability 0,81
Protein sequence
MHLPNGSQIFIENTRGDAVNATSISNAQEPKFTVASGGTDFRKGDYVIITASSWGKLLDRVVRVKSSEETSVTVEGIDTTDQNVFPAGNVTASFAKINGWTEIPCVQDLGQDGGEQQYYNYQCLSDDQEQQLPTFKSAVSLTYTFAHEYDNPIYPLLRKADESGDVKALRMYVPKAKEMRLWAGVLSFNEIPQTAVNEMETVSLSVSLKGRFTFLPANQD
Physico‐chemical
properties
protein length:220 AA
molecular weight: 24335,85190 Da
isoelectric point:4,77217
aromaticity:0,09545
hydropathy:-0,38727

Domains

Domains [InterPro]
IPR014918
52–215
IPR014918
YAF80486.1
1 220
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage CBDS-05
[NCBI] 		3459909 Viruses >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YAF80486.1 [NCBI]
Genbank nucleotide accession
PX104385 [NCBI]
CDS location
range 8718 -> 9380
strand +
CDS
ATGCACTTACCAAACGGATCACAAATTTTTATTGAGAATACTCGCGGCGATGCCGTAAATGCAACAAGCATTAGCAATGCTCAGGAACCTAAATTTACTGTGGCAAGCGGCGGAACAGATTTTAGAAAAGGCGATTACGTAATTATTACTGCGTCAAGCTGGGGAAAACTTCTTGATCGCGTTGTTCGCGTCAAGTCATCGGAAGAAACAAGCGTTACTGTTGAAGGTATCGACACTACTGATCAAAACGTTTTTCCGGCTGGTAATGTTACCGCCAGCTTTGCGAAAATTAACGGATGGACAGAGATTCCATGCGTTCAGGATTTAGGGCAAGATGGCGGTGAGCAGCAGTATTATAACTATCAGTGTCTGAGCGATGACCAGGAACAGCAGTTACCTACGTTTAAAAGCGCGGTATCACTGACCTACACATTTGCGCATGAATACGATAACCCGATTTATCCGCTCTTGCGTAAGGCTGACGAATCCGGCGACGTTAAAGCATTGCGCATGTATGTACCAAAAGCGAAAGAAATGCGCCTTTGGGCTGGCGTGCTTTCTTTCAACGAGATCCCACAAACGGCGGTAAACGAAATGGAAACCGTTTCTTTGTCGGTATCCCTGAAAGGTCGCTTTACTTTCCTTCCTGCTAACCAGGATTAA

Tertiary structure

PDB ID
191ef18aa3e0fe3e850c0b3e57f36d10affe4f0b167c807bbeea70e12e56c4d3
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8243
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A machine learning approach to predict strain-specific phage-host interactions Camejo,P.Y., Leon,L.E., Rojas,F., Ossa,A., Hurtado,R., Tichy,D., Pieringer,C., Pino,M., Mora-Uribe,P., Ulloa,S., Norambuena,R., Tobar-Calfucoy,E., Aguilera,M., Rojas-Martinez,V., Cifuentes,O., Sabag,A., Cifuentes,N., San Martin,D., Infante,C., Cifuentes,P. and Pieringer,H. — — GenBank