Protein

View in Explore
Genbank accession
XMR02072.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,53
Protein sequence
MLPFVRLFDYGNVAPVKDTVVKINSDENSISVLYSDGSLYMRGRKPISKNGSYWFIFFNRWVLCPYSVDDFWSSLYCTIIRTKQGELYYSGTNSVFGISSSVSTWTRCESYFGSISPSSIKDIKITSTTSTNNSMLILTSDSQLYGIGMNGASELGTATAPITSPLLIDTSVTAIASSEMSRNFHYIKDGIYYRCGENTFYQLGTGDNNPITTFTTLNLGSSQVIAVQATRWVTRLIVQSSTSALSLMAAGWNTQLTIGGSENTGIIRSSFTTNPYTDITANSFDKLSPVSYVNAIKSSTNIINTNGKGYNSNGAGLGRNAVSGNYGSILPIEFFDDSVDLSHVEWFGSIGNGSVSVVSIGEDLYWTGNPGYFTEQGETGYIFKFKKCVPFR
Physico‐chemical
properties
protein length:392 AA
molecular weight: 42860,45680 Da
isoelectric point:5,78549
aromaticity:0,12500
hydropathy:-0,09031

Domains

View on InterPro
Domain architecture
XMR02072.1
1 392 aa
STR 9–284 ·
ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped
Proteins with similar domain architecture

Tail Spike Domain Segmentation

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout
XMR02072.1
1 392 aa
Domain Start End Length (AA) Confidence
N-terminal 1 270 270 0,1046
Central domain 271 381 112 0,6028
C-terminal 382 392 10 0,7454
N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Taxonomy

Phage
Escherichia phage Turkey5 [NCBI] · taxon 3375711
No lineage information
Host
Escherichia coli [NCBI] · taxon 562
cellular organisms Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales

Coding sequence (CDS)

Genbank protein accession
XMR02072.1 [NCBI]
Genbank nucleotide accession
PQ471516 [NCBI]
CDS location
range 338801 -> 339979
strand -
CDS
ATGTTACCTTTTGTTAGATTGTTTGATTATGGGAATGTTGCCCCTGTCAAAGATACTGTTGTTAAAATTAATAGTGATGAAAATTCAATAAGCGTATTATATAGTGACGGGTCATTATATATGCGTGGACGGAAACCAATCAGCAAAAATGGGAGTTACTGGTTCATCTTTTTTAATAGATGGGTTTTATGTCCTTATAGTGTTGATGATTTCTGGAGTTCTTTATATTGTACTATAATTAGAACAAAACAAGGGGAATTGTACTATAGTGGGACTAACTCAGTTTTTGGTATATCATCTTCTGTTTCAACATGGACTCGTTGTGAATCATATTTTGGATCTATTTCTCCGAGTTCTATAAAAGATATAAAAATAACATCTACAACCAGTACTAACAATTCTATGCTAATACTCACAAGTGACAGTCAGTTATATGGTATAGGCATGAATGGTGCAAGTGAATTGGGTACAGCAACTGCACCAATTACATCTCCACTCTTAATTGACACTAGTGTAACTGCAATTGCATCTAGTGAAATGAGCAGAAACTTTCACTATATAAAAGATGGTATATATTATCGTTGTGGTGAGAATACTTTTTATCAATTAGGAACAGGTGATAATAATCCAATTACTACTTTTACTACATTGAATCTTGGAAGTTCTCAGGTAATTGCAGTACAAGCTACACGATGGGTAACACGTTTGATTGTTCAAAGTAGTACATCTGCTTTGTCTTTAATGGCGGCTGGTTGGAACACACAGTTGACTATAGGTGGGTCTGAAAATACTGGTATCATAAGATCATCATTTACTACAAATCCCTATACCGATATAACAGCAAATTCATTCGATAAACTTTCACCAGTATCCTATGTTAATGCAATAAAATCCAGTACTAACATTATTAATACGAATGGTAAGGGATATAATTCTAATGGTGCTGGTTTAGGCCGCAACGCAGTCTCTGGGAATTATGGTTCAATATTACCAATAGAATTCTTTGATGATAGTGTTGACTTATCACATGTTGAGTGGTTTGGTTCAATTGGTAATGGTTCAGTATCGGTAGTTAGTATAGGTGAGGATTTATACTGGACTGGAAACCCTGGGTACTTCACTGAACAAGGTGAGACTGGATATATATTTAAATTCAAAAAGTGCGTACCTTTTAGATAA

Genome Context

Tertiary structure

XMR02072.1
ESMFold structure
Source ESMFold
pLDDT 77.4
Oligomeric state monomer
Download structure

Literature

Title Authors Date PMID Source
Transient expression effect of genes from a Jumbo E. coli phage Petrzik,K. and Brazdova,S. 2023-07-26 — GenBank