Protein

View in Explore
Genbank accession
YP_011108742.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence UniProt/TrEMBL
Probability 1,00
TSP
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,98
Protein sequence
MLNNLNQPKGSTIGVLKDGRTIQQAIDGLENPVHYIKDVSITPSELLAVAVEAARLGRTVEFGPGHYTNQGHPFEVDFPLNLDVPVGTFLDFPIIIRGKTVKMVRSVATNLTATQCPAGTTVIAGDFSAFPVGSVVGVKLGDNTNGSASYNNEAGWDFTTVAAASNTSITLSTGLRWAFDKPEVFTPEYAVRYSGQLSRSSYFIPGDYTSGLNVGDIIRVENIDGTDGVHGNKEYFEMLKVSSIDSSGITVETRLRYTHVNPWIVKTGLVKGSSVTGGGRLKRLEVRGVDTPKVNSVDVDRLIVGLCYNIDVGEITSRGVGEPSSVNFTFCFGRGFLYNVRASGSVSTTDNSALKLMSCPGLIINNCSPHNSASTGSQGDYGFYVDAYYSPYWCWNDGMSINGIVTETPRSAVTRALWLFGLRGCSVSNLSGAQVFLQGCAKSVFSNIVTPDNLLELRDLSGCIVSGMANNALVLGCWNSTFDLTLFGIGSGSNLNIALRAGAGVTHPETGAPTTLGKNNTFNVKSFSPSSLAVTLSIAKQERPIFGAGCVDVDSANKSVTLGSDVTVPTMLPLALTKGIDSGSGWVGGRTKGGIWFDGNYRDAVVRWNGQYVWVADNGSLKAAPTKPDSDSPSNGVVIGP
Physico‐chemical
properties
protein length:641 AA
molecular weight: 67956,74760 Da
isoelectric point:6,03627
aromaticity:0,08580
hydropathy:-0,01919

Tail Spike Domain Segmentation

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout
YP_011108742.1
1 641 aa
Domain Start End Length (AA) Confidence
N-terminal 1 57 57 0,7956
Central domain 58 585 529 0,9735
C-terminal 586 641 55 0,9158
N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Taxonomy

Phage
Klebsiella phage Oda [NCBI] · taxon 3018522
Uroviricota Caudoviricetes Autographivirales Studiervirinae Przondovirus
Host
Klebsiella michiganensis [NCBI] · taxon 1134687
cellular organisms Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales

Coding sequence (CDS)

Genbank protein accession
YP_011108742.1 [NCBI]
Genbank nucleotide accession
NC_092455 [NCBI]
CDS location
range 36187 -> 38112
strand +
CDS
ATGTTAAACAACCTGAACCAGCCGAAAGGCTCGACCATTGGTGTGCTCAAGGATGGGCGCACTATCCAACAGGCAATTGATGGCTTGGAGAACCCGGTGCATTACATCAAAGATGTGAGCATCACGCCATCGGAACTACTGGCAGTAGCGGTAGAGGCTGCACGACTTGGCCGGACTGTGGAGTTTGGGCCGGGGCACTACACGAACCAAGGTCATCCATTCGAGGTGGACTTCCCGCTTAATCTGGATGTTCCAGTAGGAACCTTTCTGGACTTCCCTATCATCATACGAGGTAAGACCGTTAAGATGGTAAGGAGCGTGGCTACGAACCTGACTGCCACACAGTGCCCTGCTGGTACAACAGTCATTGCCGGGGACTTCTCAGCGTTCCCTGTTGGTTCCGTAGTGGGTGTAAAACTCGGGGATAATACCAACGGCTCAGCAAGTTATAACAACGAGGCTGGCTGGGATTTCACTACAGTTGCGGCGGCGTCCAACACCTCAATCACCCTCAGCACAGGGCTACGGTGGGCTTTCGATAAACCGGAAGTGTTTACCCCGGAGTATGCGGTACGATACTCAGGACAGCTGAGTCGGTCATCTTACTTCATACCGGGAGATTACACTTCCGGGCTGAATGTCGGAGATATCATCCGTGTTGAGAACATTGACGGTACTGATGGGGTCCACGGCAACAAGGAATACTTCGAGATGCTTAAGGTATCAAGTATAGATTCCTCAGGTATAACAGTTGAGACGCGCCTTCGGTATACCCATGTGAACCCTTGGATTGTAAAGACAGGGCTGGTCAAAGGCTCTTCGGTAACAGGGGGAGGTCGATTGAAGCGTTTAGAAGTACGCGGTGTTGACACGCCCAAGGTTAACAGTGTAGATGTGGACCGCTTAATTGTCGGTCTGTGCTACAACATCGACGTTGGGGAGATAACCTCTCGTGGCGTCGGTGAGCCTTCCTCGGTGAACTTCACGTTCTGCTTCGGTCGGGGCTTCCTGTACAACGTAAGGGCCTCGGGGTCGGTGTCCACAACGGATAACTCAGCGTTAAAGTTGATGAGCTGTCCGGGCCTAATCATTAACAACTGTTCACCTCACAACTCTGCATCCACTGGTTCTCAAGGTGACTATGGGTTCTACGTTGACGCCTATTACTCTCCGTACTGGTGCTGGAACGACGGCATGTCTATCAATGGGATTGTCACTGAGACACCTAGGTCGGCTGTAACACGTGCGCTGTGGCTGTTTGGTCTGAGAGGCTGTTCTGTTAGTAACCTGTCCGGTGCCCAAGTGTTCCTACAGGGCTGCGCTAAGTCGGTGTTCTCTAACATCGTCACCCCGGACAATCTCCTTGAACTACGGGACCTGTCTGGCTGCATTGTATCCGGCATGGCAAATAACGCGCTGGTACTCGGCTGTTGGAACTCGACGTTCGACCTTACGCTATTTGGTATTGGCTCTGGGTCAAACCTTAACATAGCGTTACGGGCCGGGGCAGGCGTTACCCACCCGGAGACTGGTGCGCCCACTACCCTCGGTAAGAACAACACGTTCAACGTTAAGAGTTTTAGCCCATCGTCGCTTGCTGTCACCCTAAGTATCGCCAAACAAGAGCGCCCAATCTTTGGTGCTGGCTGTGTTGACGTTGATTCTGCAAACAAGTCAGTCACTCTCGGTAGTGACGTTACCGTTCCGACCATGCTCCCGCTGGCGTTAACCAAAGGTATCGACTCCGGCTCTGGCTGGGTTGGTGGCAGGACTAAGGGTGGTATCTGGTTCGATGGTAACTACCGCGATGCGGTGGTACGCTGGAACGGTCAGTATGTATGGGTGGCTGATAATGGTTCGCTCAAAGCAGCACCTACTAAACCGGATTCTGACTCGCCTTCTAATGGTGTGGTTATTGGTCCATAA

Genome Context

Tertiary structure

YP_011108742.1
ESMFold structure
Source ESMFold
pLDDT 76.2
Oligomeric state monomer
Download structure

Literature

Title Authors Date PMID Source
A hybrid and poly-polish workflow for the complete and accurate assembly of phage genomes: a case study of ten przondoviruses Elek,C.K.A. and Adriaenssens,E.M. — — GenBank