Protein

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Genbank accession
QIW87627.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 0,96
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,92
Protein sequence
MVLRPIMVGGVPGCANIPGSGECQCWPEWTSDNAYIFGDVVQQGGVLYEARRDIPPGTPFLAADWAPYIPGATEIPPHNENSTYQQYQAVTFNDKLYTAGSLLSPGPFNPADWQEISVEGLVEVADSPTIAFGGDGSAGDPLTASVKLDPDPDNLITETANGLILTADNIPFPDPSQILISEGVTLRVDYVTGNDADADGTLAKPFATIAAAVGASDAGDMIEIYPGTYNGNFAPKSNTTVIARQDVQFTGNVTIGAAVTGVLVTDLFIDGDIILTNAGDFVEFRDVTVDNITATGNNPGVYVFDRVNVAVDVSIAGTGVGEFIFRGGIGQADFTNNSPGVMVVTDKDRTGNISHMNGYVILRDIGTILSLDSMADDTANAGLVVMSCSTFDIVTGFYGSVTKTGACRYAFQDFARENENVTPLTGPKFIVSNGRDVHGNYNPQFYTLPNGQTLNSHFNGIDNAIQALQESSPGGKLVPVDFGFSFTNGWNAGETLGAHVITRETIMPLDFNGSLFATDSSVLDATLNIMVGASVVGTVTIVDGEATFTSSQFNLDAGQVIRVVAVEEGTFDYAALTLVGHREVVYVT
Physico‐chemical
properties
protein length:588 AA
molecular weight: 62027,25080 Da
isoelectric point:4,06066
aromaticity:0,09014
hydropathy:0,05816

Domains

Domains [InterPro]
G3DSA:2.10.10.90
STR
27–115
G3DSA:2.10.10.90 IPR011050 DC_1915
cd12215
STR
27–51
cd12215 IPR012334
DC_1512
ATT
43–185
DC_1512 IPR012334
IPR011459
Unmapped
191–233
IPR011459
QIW87627.1
1 588
Architecture
STR
ATT
STR
STR 27-42 | ATT 43-185 | STR 186-588
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QIW87627.1
1 588
Domain Start End Length (AA) Confidence
N-terminal 1 233 233 0,9654
Central domain 234 442 210 0,9509
C-terminal 443 588 145 0,8751
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-233
Central
234-442
C-terminal
443-588

Taxonomy

  Name Taxonomy ID Lineage
Phage Agrobacterium phage OLIVR4
[NCBI] 		2723772 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Rhizogenic Agrobacterium biovar 1
[NCBI] 		1183400 Pseudomonadota > Alphaproteobacteria > Hyphomicrobiales > Rhizobiaceae > Agrobacterium >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QIW87627.1 [NCBI]
Genbank nucleotide accession
MT234341.1 [NCBI]
CDS location
range 50595 -> 52361
strand +
CDS
ATGGTTCTTCGTCCTATTATGGTCGGCGGTGTTCCGGGTTGCGCTAATATCCCCGGCAGCGGAGAATGCCAGTGCTGGCCCGAATGGACGTCGGATAACGCCTATATTTTCGGTGATGTCGTGCAGCAAGGCGGCGTCCTCTACGAAGCGCGCCGCGATATTCCGCCCGGTACGCCGTTTCTCGCTGCCGATTGGGCACCCTATATTCCCGGTGCCACGGAAATCCCCCCGCACAACGAAAATTCCACCTATCAACAGTATCAGGCGGTGACGTTCAATGACAAACTTTATACGGCGGGGTCACTCCTGTCGCCCGGTCCGTTTAACCCTGCCGATTGGCAGGAAATTTCCGTCGAAGGTCTTGTCGAAGTCGCCGACAGTCCGACGATAGCGTTCGGCGGCGATGGTTCGGCTGGCGATCCGCTTACCGCTTCCGTAAAGCTTGACCCTGACCCGGATAATCTGATTACCGAAACGGCAAACGGTCTCATCCTGACGGCTGATAATATCCCGTTCCCCGATCCTTCGCAGATTTTGATTTCCGAAGGCGTGACGCTGCGTGTCGATTATGTCACGGGTAACGATGCTGACGCCGACGGAACGCTTGCAAAACCTTTCGCGACCATTGCGGCAGCGGTCGGCGCTTCCGATGCTGGCGACATGATCGAAATCTACCCCGGCACGTATAACGGCAACTTTGCGCCGAAATCGAACACGACCGTCATTGCGCGACAGGATGTGCAATTCACCGGAAACGTCACCATTGGCGCGGCGGTAACGGGTGTTCTTGTCACCGATCTGTTCATTGACGGTGACATAATCCTGACGAATGCCGGTGATTTCGTCGAATTTCGTGACGTAACCGTTGATAACATCACGGCTACGGGAAATAACCCCGGTGTTTACGTTTTCGACCGTGTGAACGTCGCGGTTGATGTTTCCATAGCCGGAACGGGCGTGGGTGAGTTCATTTTTCGGGGTGGTATCGGTCAGGCCGATTTCACCAACAACTCACCGGGTGTAATGGTTGTCACTGACAAGGATCGCACCGGCAATATCAGTCACATGAACGGTTATGTCATCCTGCGTGATATCGGTACGATTTTGTCGCTCGATTCGATGGCTGATGACACTGCAAATGCTGGTCTTGTCGTCATGTCGTGCAGCACTTTCGACATTGTCACCGGTTTTTACGGTTCGGTGACAAAAACTGGCGCTTGCCGTTATGCGTTTCAGGATTTCGCCCGTGAAAATGAAAATGTAACTCCGCTGACAGGTCCGAAATTCATCGTCTCGAATGGTCGCGACGTGCACGGGAATTATAACCCTCAGTTCTACACGTTGCCGAACGGTCAAACGTTGAATTCCCATTTCAACGGAATCGATAACGCGATTCAGGCGCTTCAGGAATCGTCACCGGGTGGTAAACTTGTTCCGGTAGACTTCGGCTTCAGCTTCACGAACGGTTGGAATGCTGGTGAAACGCTCGGCGCGCATGTCATCACCCGTGAAACGATCATGCCGCTTGATTTCAACGGTTCGTTGTTCGCAACCGATAGTTCGGTTCTCGACGCAACCTTGAACATCATGGTCGGCGCGTCGGTCGTTGGAACCGTGACGATTGTTGACGGTGAAGCAACTTTCACAAGTTCGCAATTCAACCTTGACGCAGGTCAGGTCATCCGTGTCGTTGCGGTCGAAGAAGGAACGTTTGATTACGCTGCGCTGACCCTTGTCGGTCATCGTGAAGTCGTTTACGTTACCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
7a7c5a226e8f110171df2a84fa214c3aa2794f941261debbf150f40698cf2a41
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6887
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50