Protein

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Genbank accession
YP_010662485.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence RBPdetect
Probability 0,91
TF
Evidence RBPdetect2
Probability 0,95
Seq2Symm
C3 confidence 0,997
C3 0,997
C1 0,055
C2 0,003
Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).
Protein sequence
MPVSNTPIQTASTSSDAGSLSAIVNAVITRLSQTVIQSNLNETQVGTLADLDTDVKSSIVGAINDLVSKFDSGELVATYIGQLQDLNTSVKSNVVAAINEVNNKVGDIGELETEETSNVVAAINEIFAVVQGLGDIDSGEIFNQLNARVVKTGDTMSGVLNILSGVPSADTPLLGLGWNTLLPSWKVYLDSAESYAMFAFDKTTGLVQGRRQTLDKNGNLTVSGTLRTGSGTALFDTDGSIIGTAWAAVGGSANAISSINAKFAGYFQSTGGTITGKLVENIGFTGNEVTFRDLKYGNATFRSWEEIVDSTENYVLRSHNKISDTVIQTALKLGLNGNMEIAGTFKSGGGLTVGTATMGTDGGITGTAWNAFGSSPDAISAIQNYVSGRLAAFVGFPGGGTTGQALVKASNTANDFTWGGPFAPVVHTHVISDTTGLQSALDLKANAANAALTGNPTAPTPTLGDNDTSIATTAFVQAAIGSMGKRSLTISTAAPSGGVDGDVWFQTEV
Physico‐chemical
properties
protein length:509 AA
molecular weight: 52352,53920 Da
isoelectric point:4,48308
aromaticity:0,06483
hydropathy:0,04833

Taxonomy

Phage
Rhizobium phage RL38J1 [NCBI] · taxon 2663232
Uroviricota Caudoviricetes Pootjesviridae Innesvirus RL38J1
Host
Rhizobium leguminosarum [NCBI] · taxon 384
cellular organisms Bacteria Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales

Coding sequence (CDS)

Genbank protein accession
YP_010662485.1 [NCBI]
Genbank nucleotide accession
NC_070888 [NCBI]
CDS location
range 64438 -> 65967
strand +
CDS
ATGCCCGTAAGCAACACACCAATTCAAACGGCTTCTACGAGTTCTGATGCTGGTTCTCTTTCGGCTATCGTCAATGCTGTCATCACTCGGTTGTCTCAGACTGTCATCCAGTCGAACCTGAACGAAACACAGGTCGGAACACTGGCTGATCTCGACACTGACGTCAAGTCGAGTATCGTAGGTGCCATCAACGATCTCGTGAGCAAGTTCGACTCCGGTGAACTCGTTGCTACCTACATCGGCCAGCTTCAGGATCTAAACACTTCTGTCAAGTCTAACGTCGTAGCTGCAATCAACGAAGTCAACAACAAAGTCGGTGACATCGGTGAACTCGAGACTGAAGAGACCAGCAACGTCGTAGCTGCCATCAACGAGATCTTTGCGGTGGTTCAAGGTCTCGGAGACATCGACAGCGGCGAAATCTTCAACCAGTTGAATGCACGTGTCGTCAAGACCGGTGATACGATGTCTGGAGTGCTCAACATCCTCTCTGGTGTTCCGAGTGCAGATACTCCACTTCTCGGTCTCGGATGGAACACTCTCCTTCCTTCTTGGAAAGTGTATCTGGACTCCGCTGAGTCGTACGCTATGTTCGCATTCGACAAGACGACTGGTCTGGTTCAAGGACGTCGTCAGACTCTCGACAAGAACGGTAACCTCACTGTCTCTGGTACTCTCCGAACTGGCAGTGGCACAGCTCTCTTCGACACCGATGGTTCGATCATCGGTACTGCATGGGCTGCGGTCGGTGGATCTGCGAATGCCATCTCTTCGATCAACGCGAAATTCGCTGGCTACTTCCAGTCGACCGGCGGAACGATCACCGGCAAGCTCGTTGAGAACATCGGCTTCACTGGCAACGAAGTAACGTTCAGAGATCTGAAGTACGGCAACGCAACTTTCCGTAGCTGGGAAGAGATCGTCGATTCTACAGAGAACTACGTTCTTCGCTCTCACAACAAAATCAGCGACACTGTCATTCAGACTGCTCTGAAGCTCGGCTTGAACGGCAACATGGAAATTGCAGGTACGTTTAAATCCGGCGGAGGCTTGACTGTCGGCACTGCTACGATGGGCACGGACGGCGGCATCACTGGTACTGCATGGAATGCTTTTGGTTCGTCTCCTGATGCTATCAGCGCGATCCAGAATTACGTCTCTGGTCGACTTGCTGCTTTTGTTGGTTTCCCTGGTGGTGGAACGACTGGACAAGCTCTCGTCAAAGCTTCGAACACTGCAAATGACTTCACATGGGGTGGACCGTTTGCTCCTGTCGTTCACACTCATGTCATTTCAGACACGACTGGTCTCCAGTCTGCTCTGGACTTGAAAGCGAACGCTGCAAACGCTGCACTCACTGGCAATCCGACAGCTCCGACTCCGACTCTCGGTGACAACGATACGTCCATCGCGACGACTGCTTTCGTTCAGGCAGCTATCGGCAGCATGGGCAAGCGAAGCCTCACGATCTCGACTGCTGCTCCATCTGGTGGAGTCGACGGAGATGTCTGGTTCCAGACGGAGGTGTGA

Genome Context

Tertiary structure

YP_010662485.1
ESMFold structure
Source ESMFold
pLDDT 68.7
Oligomeric state monomer
Download structure

Literature

Title Authors Date PMID Source
Complete genome sequence of bacteriophage vB_RLeM_RL38JI Gunathilake,D., Bhat,S., Yost,C.K. and Hynes,M.F. 2022-09-15 — GenBank