Protein

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Genbank accession
YP_009324740.1 [GenBank]
Protein name
short tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
Protein sequence
MHRIDTPTAQKDKFGQGKNGFTNGDPATGRRATDLNSDMWDAVQEEVCTVIEAAGIQLSKGEHTQLHAAIGRLIDEQVKTRLEKNQNGADIPNKPLFLQNVGLEETINLAADALQKSQNGGDIPDKKQFARTIGAVRRPPLHLANQAGSKSPRL
Physico‐chemical
properties
protein length:154 AA
molecular weight: 16743,59380 Da
isoelectric point:7,90397
aromaticity:0,03247
hydropathy:-0,70519

Domains

Domains [InterPro]
DC_0512
STR
1–149
DC_0512
YP_009324740.1
1 154
Architecture
STR
STR 1-149 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage 118970_sal3
[NCBI] 		1813771 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella enterica
[NCBI] 		28901 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009324740.1 [NCBI]
Genbank nucleotide accession
NC_031940.1 [NCBI]
CDS location
range 15238 -> 15702
strand +
CDS
ATGCACAGAATTGATACGCCCACCGCGCAAAAAGATAAATTTGGTCAGGGAAAAAACGGATTTACGAATGGTGATCCCGCCACGGGCCGCCGCGCAACGGATCTCAACAGTGATATGTGGGATGCAGTCCAGGAAGAGGTCTGCACTGTTATTGAAGCCGCCGGCATACAACTCAGTAAAGGCGAACATACGCAGCTTCACGCCGCCATTGGCAGGCTGATCGATGAACAGGTTAAAACCCGTCTTGAAAAAAATCAGAATGGCGCGGACATCCCGAATAAGCCGCTGTTTCTCCAGAACGTTGGTTTAGAAGAAACGATAAATCTGGCCGCCGATGCACTACAAAAATCACAGAATGGCGGCGATATTCCGGACAAAAAACAATTTGCGAGAACTATCGGCGCGGTACGTCGACCACCATTACACTTGGCGAATCAGGCTGGTTCAAAATCGCCACGGTTGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
06fa067da7ad7df52fe1562af3e6bbe729372194cfa6efb248be108112339fb1
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8060
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete Genome Sequences of a Myoviridae Bacteriophages infecting Salmonella enterica subsp. Enteridis Paradiso,R., Orsini,M., Borriello,G. and Galiero,G. 2016-12-29 — GenBank