Protein

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Genbank accession
CCD57720.1 [GenBank]
Protein name
putative tailspike protein
RBP type
TSP
Evidence RBPdetect
Probability 0,72
TSP
Evidence GenBank
Probability 1,00
TSP
Evidence Phold
Probability 1,00
Protein sequence
MSRNIESIFGAVVTAPHQIPFTYTATGGEESISLPFFPLTGFVTINGGVQVPVNNYEIDGNSIHLDHALGNGDVVYCLFDKIISPEDQTVGVFEPADASGLSATLTTIGAQKYIRDGNTVTVWLNVLYPTTSDTRLAVISGLPSIGLPEITYSGICPVLNDSIIGLAVVKGGENLIRFLTQTGTDVTNADISGKNIALVLRYAV
Physico‐chemical
properties
protein length:204 AA
molecular weight: 21589,22220 Da
isoelectric point:4,46529
aromaticity:0,07843
hydropathy:0,29510

Domains

Domains [InterPro]

No domain annotations available.

Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Dickeya phage vB-DsoM-LIMEstone1
[NCBI] 		2678590 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CCD57720.1 [NCBI]
Genbank nucleotide accession
HE600015 [NCBI]
CDS location
range 121075 -> 121689
strand -
CDS
ATGTCTAGAAACATTGAAAGTATATTTGGAGCCGTAGTCACTGCTCCGCATCAGATTCCTTTCACGTATACAGCAACAGGTGGAGAGGAGTCAATCTCGTTGCCCTTCTTTCCCCTGACAGGGTTTGTCACCATTAATGGTGGTGTACAAGTCCCTGTCAACAATTATGAAATTGATGGTAATTCCATCCATCTCGACCATGCTCTTGGAAATGGTGATGTTGTGTATTGTTTGTTTGATAAGATCATTTCACCAGAAGATCAGACTGTTGGTGTGTTTGAGCCTGCGGACGCCTCCGGCCTTTCGGCAACTTTGACCACAATAGGTGCTCAGAAATATATTCGCGATGGGAATACTGTCACGGTGTGGTTGAATGTTCTATACCCAACAACATCAGATACGCGTTTAGCCGTAATTTCAGGTCTTCCATCTATTGGTCTTCCAGAGATTACATATTCTGGAATATGTCCTGTGTTAAACGACTCCATTATTGGGCTTGCCGTTGTGAAAGGAGGAGAAAATTTGATTCGATTCCTCACACAAACAGGCACAGACGTCACCAATGCAGATATTTCTGGTAAAAATATCGCATTGGTGCTGAGATACGCCGTTTAG

Tertiary structure

PDB ID
9409f1ab8f8585b351e1f3e2b8bd5dc683a034939538eb73da2e9fe7b607f0b1
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8311
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50