Protein

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Genbank accession
CAB4149964.1 [GenBank]
Protein name
Collagen triple helix repeat
RBP type
TF
Evidence RBPdetect
Probability 0,91
TF
Evidence RBPdetect2
Probability 0,94
TF
Evidence Phold
Probability 1,00
Protein sequence
MSQPPAPFDRSWSFTDFSQSNPTTPHQGQKIDQELNNARTAINSTISRLGEIQADDGKVRTTALNLAVIAEEVEPLLTDAPVQAVEAAGAQQVGLVNDAGDAKVAELEAVLTSQNALDAIAAKDDAVDAAGVADAFANSATNSAIAAQGYANTALQAKNSAQVHAQVAVDAANSIPLIVGPVGPAGPQGQQGVPGVAGQTGPAGQQGVQGIQGIQGIQGVPGVVSASAPLYYDDGTQNISIDLGGYATESWVNGQGFASQSDWRLTAVASSSFINLAVAATSGLFNFTYYDGYAGSDVTIQLEIQSPVDGTNYNGYSVGFDTTQPNGYWQVVGSSVVIGLSGYSNMQEALNALSSGSGSGGWKLIGSGSPYADASVLSGAGRTVYNVPITAQPGDSLVLRQGLFSNLTETIKGFNWNDYLIGTTANGILTGYAKSGFLTAGDAATFALKSGTTFTGKVNFAPGSTISPINIGSGSSPSSSVAGDIWMGTNTISYKDGANLVRTITANGLTNTFSAPQIIDTTATTPALRVTQKGTGNVLLVEDALNPDTTALVVEQSGNVGIGVATGFTATAKLEVVGNTKSTTLSTGAGPTFSVNSTTTHNGGSDTLDLLITVNGVNYRIGLRPA
Physico‐chemical
properties
protein length:626 AA
molecular weight: 63642,33730 Da
isoelectric point:4,32854
aromaticity:0,06709
hydropathy:-0,02236

Domains

Domains [InterPro]
IPR008160
180–222
IPR008160
CAB4149964.1
1 626
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage uncultured Caudovirales phage
[NCBI] 		2100421 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CAB4149964.1 [NCBI]
Genbank nucleotide accession
LR796534 [NCBI]
CDS location
range 7574 -> 9454
strand +
CDS
ATGAGTCAGCCTCCCGCTCCTTTTGACCGCTCTTGGTCCTTCACGGATTTTAGCCAAAGCAACCCTACCACCCCTCACCAGGGGCAGAAAATCGACCAGGAGCTGAACAATGCCCGAACGGCGATCAACTCCACCATCTCCCGGCTGGGTGAAATCCAGGCCGACGATGGCAAGGTGCGTACGACTGCTCTGAATCTTGCTGTCATCGCCGAGGAAGTCGAACCGTTGCTGACGGACGCTCCTGTTCAAGCCGTTGAGGCTGCCGGCGCGCAGCAGGTTGGACTGGTAAACGACGCTGGTGATGCGAAAGTGGCTGAACTTGAGGCTGTTCTGACGTCCCAGAACGCTCTTGACGCCATTGCAGCCAAGGATGACGCCGTGGATGCTGCTGGCGTGGCTGACGCATTCGCTAATTCCGCCACCAATAGCGCGATTGCTGCGCAAGGCTACGCCAACACCGCCTTGCAGGCGAAAAACTCCGCACAGGTTCACGCCCAGGTGGCTGTTGACGCTGCAAACAGCATCCCGCTGATCGTCGGACCTGTTGGTCCAGCCGGTCCGCAAGGCCAGCAGGGTGTTCCAGGCGTGGCAGGTCAGACAGGTCCAGCCGGCCAGCAAGGCGTACAAGGTATCCAGGGAATTCAAGGCATTCAAGGCGTTCCTGGCGTAGTCAGCGCGTCTGCTCCGCTTTATTATGACGATGGTACGCAGAACATCAGCATCGATCTGGGTGGCTACGCCACCGAGTCTTGGGTCAACGGACAAGGATTTGCGTCCCAGTCTGACTGGAGGCTTACCGCCGTAGCCAGTTCTTCGTTCATCAATCTTGCCGTCGCCGCCACGTCTGGCCTGTTTAACTTCACCTATTACGATGGCTATGCAGGTTCTGACGTCACCATTCAGCTTGAAATCCAGTCTCCTGTCGATGGCACGAACTACAACGGATACTCTGTTGGTTTCGACACGACCCAGCCTAACGGATATTGGCAGGTAGTCGGATCTAGCGTAGTTATCGGACTTTCCGGCTACTCCAACATGCAGGAAGCTCTCAATGCCTTGAGCAGCGGTAGCGGTTCTGGCGGATGGAAGCTGATTGGTAGCGGAAGTCCTTACGCCGATGCCAGCGTCCTTTCCGGCGCCGGTCGAACCGTCTACAACGTACCTATCACCGCACAACCTGGCGACAGCCTGGTTCTCCGCCAGGGACTTTTCAGCAACCTCACGGAAACGATCAAGGGTTTCAACTGGAACGATTACCTTATTGGAACTACCGCCAATGGCATCCTTACCGGATACGCCAAGAGCGGATTCCTTACCGCAGGAGACGCCGCAACTTTCGCACTCAAGAGCGGAACGACGTTCACCGGCAAGGTGAACTTTGCACCAGGCTCTACCATCTCTCCGATTAACATCGGAAGCGGATCTTCTCCTTCGTCTAGTGTGGCTGGTGATATCTGGATGGGAACGAATACCATTTCTTACAAGGATGGCGCTAACCTTGTTCGCACGATTACGGCCAACGGACTGACCAACACGTTCTCTGCTCCGCAGATCATCGACACCACGGCTACCACCCCTGCACTCCGCGTGACGCAGAAGGGAACTGGAAACGTCCTGTTGGTTGAAGACGCCCTCAACCCAGACACGACCGCCCTGGTCGTCGAGCAGAGCGGCAATGTCGGTATCGGTGTGGCGACTGGCTTCACCGCCACGGCCAAGCTTGAAGTCGTCGGTAACACCAAGTCCACGACCCTTTCGACCGGCGCAGGTCCGACCTTCTCCGTTAACAGCACCACCACGCACAACGGAGGTTCTGACACTCTCGACCTGTTGATCACCGTCAACGGAGTGAACTACCGCATCGGTCTTCGACCAGCCTAA

Tertiary structure

PDB ID
fb1290ac651a4a119d10045961a6cdcb01adde875bb58784e86f8701ec88858c
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5731
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50