Protein

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Genbank accession
YP_009153046.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,89
Seq2Symm
C1 confidence 0,884
C1 0,884
C3 0,130
I 0,008
Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).
Protein sequence
MTIQNKEPFVYATGNGVTATIPFTFPANSASDVYGAINGIDQSATVVLSPDQINSPGGTLTFNGGAAPLGSSVLVYRNTKMEQTLSYPTKGSFPSKSHESAMDKLVMIAQDLNFLLASRCLRAPNGEKFIKELPPIQERSGKFLGFDPAGNPYAAAPIRGEDGTNGLPPYISDGTDGFNAGNWVAFSIQDNSYKDTGVRALGVDGLPPYISNGTDGFTSGNWIVDDGSTNYVDTGVRAKGDKGDKGDDALSPYVSDGTDGFTAGNWVADNGSGAYADTGIGAKGDKGDTGDDGLPPYISDGSDTFVAGNWIADNGSGVYVDTGIPARPNLQYATETTIGGMRWSLVGTTLNLYFTDV
Physico‐chemical
properties
protein length:357 AA
molecular weight: 37278,45820 Da
isoelectric point:4,28619
aromaticity:0,09804
hydropathy:-0,32689

Taxonomy

Phage
Vibrio phage QH [NCBI] · taxon 1558469
Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes
Host
Vibrio cholerae [NCBI] · taxon 666
cellular organisms Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Vibrionales

Coding sequence (CDS)

Genbank protein accession
YP_009153046.1 [NCBI]
Genbank nucleotide accession
NC_027397 [NCBI]
CDS location
range 19362 -> 20435
strand +
CDS
ATGACTATCCAGAACAAAGAACCCTTTGTATATGCCACTGGTAACGGAGTGACAGCCACTATTCCCTTCACGTTTCCGGCCAACTCGGCCTCGGATGTGTATGGCGCAATCAACGGAATAGACCAATCAGCAACTGTGGTGCTGAGTCCCGACCAGATAAATAGCCCAGGCGGAACACTGACATTTAATGGCGGCGCGGCTCCCTTGGGTTCAAGTGTCTTGGTCTATCGCAACACAAAGATGGAGCAGACTTTGTCGTACCCGACTAAGGGCAGCTTTCCGTCCAAGTCACATGAGTCTGCTATGGATAAACTGGTGATGATTGCGCAGGACTTGAATTTCCTTTTAGCGTCTCGTTGCTTGAGAGCGCCGAACGGAGAAAAATTCATCAAGGAATTGCCACCAATCCAAGAACGCTCCGGAAAATTTCTTGGCTTTGACCCTGCAGGCAATCCATATGCGGCAGCTCCGATTCGCGGCGAGGACGGCACAAATGGTCTTCCTCCTTACATCTCGGACGGTACTGATGGATTCAACGCCGGAAACTGGGTAGCATTCTCCATTCAAGACAACTCATATAAGGATACAGGCGTCCGCGCTCTTGGTGTTGATGGCTTACCTCCTTACATCTCGAACGGCACTGACGGATTTACGTCAGGAAACTGGATTGTCGACGATGGAAGCACTAACTATGTTGACACGGGAGTGAGGGCGAAGGGAGACAAAGGCGACAAAGGCGACGACGCTCTATCACCTTATGTGTCTGATGGGACTGACGGATTCACCGCAGGAAACTGGGTCGCGGACAATGGCTCCGGTGCCTATGCGGACACAGGAATCGGGGCAAAAGGTGATAAGGGTGATACAGGCGATGACGGTCTACCGCCTTACATCTCGGATGGTAGTGATACCTTTGTTGCGGGCAACTGGATTGCAGACAATGGCTCTGGTGTGTATGTTGATACGGGTATTCCTGCTCGACCGAATTTGCAATACGCCACAGAAACCACAATCGGCGGTATGCGTTGGTCATTGGTTGGGACTACTTTAAACTTGTATTTTACGGACGTTTAA

Genome Context

Tertiary structure

YP_009153046.1
ESMFold structure
Source ESMFold
pLDDT 79.3
Oligomeric state monomer
Download structure

Literature

Title Authors Date PMID Source
Complete genome sequences of seven Vibrio cholerae phages isolated in China Bhandare,S.G., Warry,A., Emes,R.D., Su,J., Barrow,P.A. and Atterbury,R.J. — 29167238 GenBank