Protein

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Genbank accession
YP_009153046.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MTIQNKEPFVYATGNGVTATIPFTFPANSASDVYGAINGIDQSATVVLSPDQINSPGGTLTFNGGAAPLGSSVLVYRNTKMEQTLSYPTKGSFPSKSHESAMDKLVMIAQDLNFLLASRCLRAPNGEKFIKELPPIQERSGKFLGFDPAGNPYAAAPIRGEDGTNGLPPYISDGTDGFNAGNWVAFSIQDNSYKDTGVRALGVDGLPPYISNGTDGFTSGNWIVDDGSTNYVDTGVRAKGDKGDKGDDALSPYVSDGTDGFTAGNWVADNGSGAYADTGIGAKGDKGDTGDDGLPPYISDGSDTFVAGNWIADNGSGVYVDTGIPARPNLQYATETTIGGMRWSLVGTTLNLYFTDV
Physico‐chemical
properties
protein length:357 AA
molecular weight: 37278,45820 Da
isoelectric point:4,28619
aromaticity:0,09804
hydropathy:-0,32689

Domains

Domains [InterPro]

No domain annotations available.

Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage QH
[NCBI] 		1558469 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio cholerae
[NCBI] 		666 Bacteria > Proteobacteria > Gammaproteobacteria > Vibrionales > Vibrionaceae > Vibrio

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009153046.1 [NCBI]
Genbank nucleotide accession
NC_027397 [NCBI]
CDS location
range 19362 -> 20435
strand +
CDS
ATGACTATCCAGAACAAAGAACCCTTTGTATATGCCACTGGTAACGGAGTGACAGCCACTATTCCCTTCACGTTTCCGGCCAACTCGGCCTCGGATGTGTATGGCGCAATCAACGGAATAGACCAATCAGCAACTGTGGTGCTGAGTCCCGACCAGATAAATAGCCCAGGCGGAACACTGACATTTAATGGCGGCGCGGCTCCCTTGGGTTCAAGTGTCTTGGTCTATCGCAACACAAAGATGGAGCAGACTTTGTCGTACCCGACTAAGGGCAGCTTTCCGTCCAAGTCACATGAGTCTGCTATGGATAAACTGGTGATGATTGCGCAGGACTTGAATTTCCTTTTAGCGTCTCGTTGCTTGAGAGCGCCGAACGGAGAAAAATTCATCAAGGAATTGCCACCAATCCAAGAACGCTCCGGAAAATTTCTTGGCTTTGACCCTGCAGGCAATCCATATGCGGCAGCTCCGATTCGCGGCGAGGACGGCACAAATGGTCTTCCTCCTTACATCTCGGACGGTACTGATGGATTCAACGCCGGAAACTGGGTAGCATTCTCCATTCAAGACAACTCATATAAGGATACAGGCGTCCGCGCTCTTGGTGTTGATGGCTTACCTCCTTACATCTCGAACGGCACTGACGGATTTACGTCAGGAAACTGGATTGTCGACGATGGAAGCACTAACTATGTTGACACGGGAGTGAGGGCGAAGGGAGACAAAGGCGACAAAGGCGACGACGCTCTATCACCTTATGTGTCTGATGGGACTGACGGATTCACCGCAGGAAACTGGGTCGCGGACAATGGCTCCGGTGCCTATGCGGACACAGGAATCGGGGCAAAAGGTGATAAGGGTGATACAGGCGATGACGGTCTACCGCCTTACATCTCGGATGGTAGTGATACCTTTGTTGCGGGCAACTGGATTGCAGACAATGGCTCTGGTGTGTATGTTGATACGGGTATTCCTGCTCGACCGAATTTGCAATACGCCACAGAAACCACAATCGGCGGTATGCGTTGGTCATTGGTTGGGACTACTTTAAACTTGTATTTTACGGACGTTTAA

Tertiary structure

PDB ID
231fcc5bde7a48058e346a60cff9b796adc32d60169ed1f78167b06628720dc7
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7926
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequences of seven Vibrio cholerae phages isolated in China Bhandare,S.G., Warry,A., Emes,R.D., Su,J., Barrow,P.A. and Atterbury,R.J. — — GenBank