Protein

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Genbank accession
AEH21862.1 [GenBank]
Protein name
VHS1049 protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MQRIVAIDRQPSHELHPDFLKLPIFCVRQIENQNAYKQYGVRRESDGWAIAFMNDSSKYINLEFRADRHNHARYTGTIERAANDSSDVNETIPIRLPNPHGNTGNYWAGLQDVELCVWVEYLPALIDDGFGNMIEAPRSKINNFYSLSYADFEQPTYNSRDGVLTIKMRANRVSRKDYSLPEIRGVRIHYAMQAGFIANLITRSNQDSIMAQFVNTDIGSFELQHKPPSDVLANGLPRFEHAGTHGFVATSRTTDNLIRSTIYKGYAARAIYQFDDNPTTTVGTILQSHRTMHLNNFNVCPVQATRNQRYYSTPMFMASTSTFGNGTGLMEVMTQNQNLATQNVPGYTLDKTKVSRSYIYAVNFAFDNGDVGFTGLPDAEKANTYKFSPLVDSGSEYFSYNRISGDTTYQIQGKPTASIAVDISGGKKQFVIRGNSQTLLTMDFEDVDTLESKAVTAKDFRVRLFNGGFGGADHHMSYNERTIGSLEFAAANLTIDTSNNANPYDSGKAFAGFGYRYVEGAGVGAPTPPPVPVVESYDGVIHPSWQVLF
Physico‐chemical
properties
protein length:549 AA
molecular weight: 61265,61260 Da
isoelectric point:6,17234
aromaticity:0,11293
hydropathy:-0,43078

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AEH21862.1
1 549
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,5969
Central domain 11 259 250 0,6172
C-terminal 260 549 289 0,3864
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-259
C-terminal
260-549

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 1
[NCBI] 		187944 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio harveyi
[NCBI] 		669 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AEH21862.1 [NCBI]
Genbank nucleotide accession
JF713456 [NCBI]
CDS location
range 24037 -> 25686
strand +
CDS
TTGCAACGTATAGTTGCGATAGACCGACAACCTAGCCACGAACTACACCCCGATTTTTTGAAGTTACCGATCTTTTGTGTTCGACAGATAGAGAACCAAAACGCCTACAAACAATACGGGGTTAGGCGAGAGTCTGACGGGTGGGCGATCGCGTTTATGAACGATTCATCTAAGTACATTAATCTAGAGTTTAGAGCCGATCGTCACAATCACGCGAGATATACAGGCACAATAGAAAGAGCCGCGAACGATTCTAGCGATGTAAACGAAACTATACCGATCAGGTTGCCGAACCCACACGGGAACACAGGAAACTATTGGGCGGGGTTGCAAGACGTTGAGTTGTGCGTGTGGGTAGAATACCTTCCCGCCCTGATAGACGACGGATTCGGTAATATGATCGAAGCCCCTAGATCCAAGATAAATAACTTTTATAGTTTATCCTATGCCGATTTCGAACAACCTACATATAACAGTCGCGACGGTGTTTTAACTATAAAGATGCGCGCTAATCGCGTTTCGCGTAAAGATTATTCTTTGCCAGAAATACGAGGGGTTAGAATACACTACGCAATGCAAGCGGGATTTATCGCAAATCTTATAACCCGAAGTAATCAAGATAGTATCATGGCGCAGTTCGTTAATACGGATATTGGATCTTTTGAACTACAACACAAGCCGCCTTCAGACGTACTAGCTAACGGTCTACCTCGCTTTGAACATGCGGGCACGCACGGGTTTGTCGCTACAAGTAGAACCACCGACAATTTAATAAGGTCTACGATTTACAAGGGTTATGCAGCACGGGCGATCTATCAATTCGACGATAACCCGACTACAACCGTAGGCACTATTTTACAATCACATAGGACGATGCACCTTAATAACTTCAACGTTTGCCCTGTACAGGCGACAAGAAATCAAAGATATTATTCTACGCCTATGTTTATGGCGTCTACGTCTACTTTCGGTAACGGTACGGGGTTAATGGAGGTAATGACACAAAACCAAAACTTAGCCACTCAAAACGTACCGGGGTATACTCTAGATAAAACTAAGGTATCACGAAGTTACATATACGCCGTTAACTTTGCCTTTGATAATGGGGACGTAGGCTTTACCGGGCTACCGGACGCGGAGAAAGCCAATACTTATAAATTCTCGCCATTAGTTGATTCTGGATCTGAATACTTTTCATATAACAGAATAAGCGGCGATACAACATACCAGATACAAGGAAAACCTACCGCGTCTATTGCCGTAGATATTAGCGGGGGTAAAAAACAATTTGTGATCCGTGGTAACTCGCAAACGTTATTAACTATGGATTTTGAAGACGTAGACACCCTAGAGAGTAAAGCCGTTACCGCTAAAGACTTTAGAGTGCGTTTATTTAACGGTGGTTTTGGCGGCGCGGATCATCATATGAGTTACAACGAACGCACGATAGGATCGTTAGAGTTTGCCGCCGCAAATCTAACCATTGACACAAGCAACAACGCTAACCCTTACGATTCGGGGAAAGCATTTGCAGGGTTCGGGTATCGTTACGTTGAAGGTGCGGGGGTTGGAGCACCAACACCGCCGCCCGTTCCCGTGGTTGAATCTTACGACGGGGTTATACACCCTAGTTGGCAAGTTTTGTTCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
e4798aa109527831df7477ab81a9af3e95e74259fb1437882de88eaffa80c6e4
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,2512
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50