Protein

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UniProt accession
A0A8S5NCX5 [UniProt]
Protein name
Pectate lyase
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,60
Protein sequence
MDFDKIKQNILNSSETSTSESENIAGSELHEEFEINNFLPEFEPLKISGKNLAQQYVSAFNTGMNIYQCLNYLQGYVYTLVTAMNETIEAWNTVVPLLEQATKEWTDEEFDYKWSILKPQVIELVTNLTIETFNKAWEDLKPVVIKLAQDTTDAEFKKQWDILKPQVITLVEETTTNKFNEEWEKLKPTIIQLSTNTTIEQFNRSWTELKPQVIELAQTTTNTKFDEKWTELRPQLIELAQTTTSDKFHEKWTELQPTLTETVNNLAKTQTTTTFNAEWTKLKPQIIELSQTTTSTKFDEKWTELQPTLNTTVENLVNTNLEAFKSTLWQEVTKNESFPFLLPENFGAVGDGQTDDHTAFNLCFAKASETNKNVLLSTKTYLIGRILRATGGFSIIGLNTNIVVNDNDFLTQTQNITFKNIFFLNKAPSNNVRFLIYKARDTYFDNCEFIDIGSIYGELLENTIKTQLLNNCRLLNTSIYNKKQGVTPSENKVYVVNNTLLLNTNNICHSFWCDKSGSKIYFNNCSFNSEFTKFNVTMFPTVDDMIFNNCSFNVKNTLGLIGLLTVGTDTYIGFNKCNINAKSIVNNSLNNYLYLNIKDSVINVDKIMDNSQECSLWLENNQMDIKPIINSGTGKVNLVEIQQKYSNTTQNVFPWIGEIPSTCVNNVIINNNDGAYYVTTENEDKTIIKLDYYTSLLANYTPNAPYYEVQILLPSLDLTGYELNLSSMNCNLFALKNDSYELIDYVHLYLDDTTVSTIINEQGEFEHTEITLKLLQAYAKLKTDTAVAGIMNIDTSFTFIFEKTS
Physico‐chemical
properties
protein length:805 AA
molecular weight: 92105,69060 Da
isoelectric point:4,67537
aromaticity:0,10807
hydropathy:-0,33193

Domains

View on InterPro
Domain architecture
A0A8S5NCX5
1 805 aa
STR 342–605 ·
ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped
Proteins with similar domain architecture

Tail Spike Domain Segmentation

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout
A0A8S5NCX5
1 805 aa
Domain Start End Length (AA) Confidence
N-terminal 1 357 357 0,9942
Central domain 358 634 278 0,9344
C-terminal 635 805 170 0,9377
N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Taxonomy

Phage
Podoviridae sp. ctTZV6 [NCBI] · taxon 2826556
Uroviricota Caudoviricetes
Host No host information

Coding sequence (CDS)

Genbank protein accession
DAD92080.1 [NCBI]
Genbank nucleotide accession
BK015127 [NCBI]
CDS location
range 8936 -> 11353
strand +
CDS
ATGGATTTTGATAAAATAAAACAAAATATTTTAAATTCAAGTGAAACATCTACAAGTGAAAGCGAAAATATAGCTGGTTCAGAACTCCATGAAGAATTTGAGATCAATAACTTTTTACCCGAATTCGAACCTTTAAAGATAAGTGGGAAAAATTTAGCACAACAATATGTTAGTGCGTTTAATACAGGTATGAATATTTACCAATGTTTAAATTACTTACAAGGTTATGTTTATACATTGGTAACGGCAATGAATGAAACAATTGAAGCATGGAACACAGTCGTGCCACTATTAGAACAAGCCACAAAAGAATGGACTGACGAAGAGTTTGACTATAAATGGTCAATTCTAAAACCACAAGTTATTGAGCTTGTGACAAACTTAACAATTGAAACATTCAATAAGGCATGGGAAGACTTAAAACCGGTTGTTATTAAATTGGCACAGGATACAACAGACGCCGAATTTAAAAAACAATGGGATATTTTAAAACCGCAAGTTATTACACTGGTGGAAGAAACAACAACAAATAAATTTAATGAGGAATGGGAAAAATTAAAACCGACTATTATACAATTATCAACAAATACAACAATTGAACAATTTAATAGATCATGGACCGAATTAAAACCACAGGTTATTGAGTTAGCTCAAACTACAACTAACACTAAGTTCGACGAGAAATGGACGGAATTACGTCCACAATTAATTGAACTAGCACAAACGACAACGAGTGATAAGTTTCACGAAAAATGGACAGAATTACAGCCGACGTTAACAGAAACTGTTAATAATTTAGCTAAAACACAAACAACTACTACATTTAATGCAGAATGGACTAAGTTAAAACCACAAATTATTGAACTTTCACAAACAACAACTAGCACGAAATTCGACGAAAAATGGACGGAATTACAACCAACATTAAACACAACCGTTGAAAATCTAGTTAATACAAATTTAGAAGCATTTAAAAGTACATTGTGGCAAGAGGTCACTAAGAATGAAAGTTTTCCATTTCTACTACCCGAGAATTTTGGTGCTGTGGGAGATGGTCAAACGGATGATCATACAGCTTTTAATTTATGCTTTGCGAAAGCAAGCGAAACAAATAAAAATGTTTTATTAAGTACTAAAACATATTTAATTGGTAGAATTTTACGTGCTACCGGTGGTTTTAGTATTATAGGATTAAACACTAACATTGTTGTAAATGATAATGATTTTTTAACTCAAACACAAAATATTACTTTTAAAAATATATTTTTTCTTAATAAAGCACCTTCAAATAACGTTAGATTTTTAATTTATAAAGCACGTGATACTTATTTCGATAACTGTGAATTTATTGATATAGGTTCTATTTATGGTGAATTATTAGAAAATACTATAAAAACACAATTATTAAATAACTGTAGGTTATTAAACACATCTATTTATAATAAAAAACAAGGTGTTACACCATCAGAAAATAAAGTTTATGTAGTAAACAACACACTTCTTCTTAATACTAATAATATATGTCACTCTTTTTGGTGTGATAAAAGTGGAAGTAAAATTTATTTTAATAATTGTAGTTTTAATTCAGAGTTTACTAAATTTAATGTTACCATGTTCCCAACAGTTGACGATATGATATTTAATAATTGTAGTTTTAATGTTAAAAATACATTAGGTTTAATTGGCTTGTTAACAGTTGGTACGGATACTTATATTGGTTTTAATAAGTGTAATATTAATGCAAAGTCAATTGTTAATAATAGTTTAAATAACTATTTATATTTAAATATTAAAGATAGTGTTATTAATGTTGATAAAATAATGGATAATAGTCAAGAATGTAGTTTATGGTTAGAAAACAATCAAATGGATATTAAACCTATTATTAATAGTGGCACAGGTAAAGTAAATTTAGTTGAGATTCAACAAAAGTATAGTAATACCACTCAAAATGTTTTTCCATGGATCGGTGAAATACCATCCACTTGTGTAAACAATGTTATAATAAATAACAATGACGGTGCATATTATGTAACTACAGAAAATGAAGATAAAACAATTATTAAATTGGATTATTATACTAGTTTATTGGCTAATTACACACCAAATGCACCTTATTATGAAGTTCAAATATTATTACCTAGTTTAGATTTAACAGGGTATGAACTTAATTTATCATCTATGAATTGTAATTTATTCGCGCTAAAAAATGATAGTTATGAATTAATTGACTATGTGCATTTATATTTAGATGACACTACTGTATCGACTATTATTAATGAACAGGGAGAATTTGAGCACACAGAAATCACATTAAAACTTTTACAGGCCTATGCTAAACTTAAAACAGATACAGCAGTAGCCGGTATAATGAATATTGACACAAGTTTTACATTTATTTTTGAAAAAACTAGCTAA

Genome Context

Gene Ontology

Description Category Evidence (source)
GO:0044423 virion component Cellular Component IEA:UniProtKB-KW (UniProt)
GO:0016829 lyase activity Molecular Function IEA:UniProtKB-KW (UniProt)
GO:0051701 biological process involved in interaction with host Biological Process IEA:UniProtKB-ARBA (UniProt)
GO:0019058 viral life cycle Biological Process IEA:UniProtKB-ARBA (UniProt)

Tertiary structure

A0A8S5NCX5
ColabFold structure
Source ColabFold
pLDDT 69.3
Oligomeric state monomer
Download structure