Protein

View in Explore
Genbank accession
YP_009191789.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MATPRTVNTWPLNGVVREFDITFDYLSRNFIQVMLIGGDFKKLVLGTDYTFVTNTRIRTTLAYQTPYTAIEIRRVTSTTERLVEFQDASILHAQDLNIDALQVMHVAEEAREAATETIGVNGDGQLDARGRKIVNLGNAVDPQDALPLGQYLADKGGAAESAAAAAQSASNAATSASQAQSSNLAAALNASAAESARAAAVAAQGTATTEANRAKTEADRANTRANDSAASAGASATSAGQAAGSATNAANSATAAQQSASTAQTQLNLFQDQYWGVYASDPVTGPGGRPRVTGVFYFNSATGTHRVWNGTAWANAPQGPAGTPGTNGTNGATGPKGKDGSVPRRGWRVAYAATNKIRFFPYYTEQVRIRQNNAGSGEWPIIYQDESSATFTEYTLGQGTFTGLSNEVLYVLVPYGTNSANELSIAPITASEASPTFDPEYGWIRGGIYLSQKVPIFGAFMLVGGQFKDDDTTRGVVSTANQPPRSLSIRRSTNLTIPQAQSANIQQVSFICLSATVQGYSNVAVGLPNTGGGFYSTHVVQNTGTTTEVQIDGSLCAFPNGPLFSASIGLQHPFSAGGYNLKTKLINANVGDITANGAGPLGMNCSLNAMIFDRQ
Physico‐chemical
properties
protein length:615 AA
molecular weight: 64519,54400 Da
isoelectric point:5,85001
aromaticity:0,08130
hydropathy:-0,23317

Domains

View on InterPro
Domain architecture
YP_009191789.1
1 615 aa
ATT 3–128 ·
ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped
Proteins with similar domain architecture

Taxonomy

Phage
Delftia phage IME-DE1 [NCBI] · taxon 1647385
Uroviricota Caudoviricetes Autographivirales Piedvirus Piedvirus IMEDE1
Host
Delftia sp. 670 [NCBI] · taxon 1537702
Bacteria Proteobacteria Betaproteobacteria Burkholderiales Comamonadaceae Delftia

Coding sequence (CDS)

Genbank protein accession
YP_009191789.1 [NCBI]
Genbank nucleotide accession
NC_028702.1 [NCBI]
CDS location
range 9339 -> 11186
strand +
CDS
ATGGCAACGCCACGCACTGTCAATACTTGGCCCCTGAACGGGGTCGTCCGGGAGTTCGACATTACGTTCGACTACCTCTCCCGTAACTTCATCCAGGTCATGTTGATCGGTGGAGACTTCAAGAAGCTGGTCCTGGGCACCGACTACACGTTCGTGACCAACACCCGCATTCGCACTACCCTCGCCTACCAGACGCCCTACACGGCCATCGAGATTCGCCGGGTGACTTCCACCACGGAACGTCTGGTGGAGTTCCAGGACGCATCCATCCTGCACGCACAGGACCTGAACATCGACGCGCTCCAAGTGATGCACGTTGCTGAGGAGGCCCGTGAGGCTGCTACCGAGACCATCGGGGTCAACGGGGACGGTCAACTGGATGCCCGTGGTCGCAAGATCGTGAACCTCGGGAACGCTGTGGACCCTCAGGATGCCCTGCCCCTCGGCCAGTATCTGGCTGACAAGGGAGGCGCTGCTGAGTCCGCTGCTGCCGCTGCCCAATCCGCTTCCAATGCGGCCACCAGTGCATCCCAGGCCCAGTCCAGCAACCTCGCTGCTGCCCTGAATGCAAGTGCTGCTGAGTCCGCTCGTGCAGCCGCTGTAGCTGCCCAGGGGACTGCCACGACCGAGGCCAACCGTGCGAAGACGGAAGCCGACCGGGCCAACACCCGTGCGAACGACTCCGCAGCCTCCGCAGGAGCCTCTGCAACGTCCGCAGGCCAAGCAGCAGGTTCTGCCACCAATGCGGCCAATAGCGCCACTGCGGCCCAGCAGAGTGCCTCCACGGCCCAAACCCAGTTGAACCTGTTTCAGGACCAATACTGGGGCGTGTACGCCTCGGACCCTGTGACAGGCCCTGGAGGTCGCCCACGGGTGACAGGCGTGTTCTACTTCAACAGTGCCACCGGAACCCATCGGGTCTGGAACGGGACTGCATGGGCGAATGCTCCTCAGGGTCCTGCGGGAACCCCCGGGACGAACGGGACCAATGGAGCTACCGGGCCAAAAGGTAAGGACGGCTCTGTTCCTCGCCGTGGATGGAGGGTCGCCTATGCGGCCACCAATAAGATTCGCTTCTTCCCGTACTACACGGAGCAAGTGCGTATCCGGCAGAACAACGCAGGCTCCGGTGAGTGGCCTATCATCTACCAAGATGAGTCCAGTGCAACCTTCACGGAATACACGCTGGGCCAGGGCACATTCACGGGTCTCTCCAACGAGGTCCTCTATGTGCTGGTTCCCTACGGGACCAATAGCGCCAACGAACTGAGCATCGCGCCGATCACCGCATCGGAGGCAAGCCCTACGTTTGACCCTGAGTACGGATGGATTCGTGGAGGCATCTACCTGAGCCAGAAGGTTCCGATCTTCGGTGCATTCATGCTGGTAGGTGGGCAGTTCAAGGACGACGACACCACTCGTGGGGTGGTCTCCACTGCAAACCAGCCTCCCCGTTCCTTGAGCATCCGCCGTTCGACCAACCTGACGATCCCTCAGGCTCAGTCCGCGAACATCCAGCAGGTGTCCTTCATCTGCCTGTCAGCTACTGTCCAAGGCTACAGTAACGTGGCCGTGGGCCTGCCGAACACTGGCGGTGGCTTCTACAGCACCCATGTGGTGCAGAACACGGGGACAACTACCGAGGTTCAAATCGACGGCTCCCTGTGTGCCTTCCCGAACGGACCTCTGTTCTCCGCATCCATTGGTCTCCAGCACCCCTTCAGTGCTGGTGGCTACAACCTGAAGACCAAGCTCATCAACGCCAACGTGGGTGATATCACGGCGAACGGCGCAGGCCCTCTGGGCATGAACTGTTCCCTGAACGCAATGATCTTCGACCGACAATAA

Genome Context

Tertiary structure

YP_009191789.1
ESMFold structure
Source ESMFold
pLDDT 70.3
Oligomeric state monomer
Download structure

Literature

Title Authors Date PMID Source
Isolation and genomic analysis of Delftia bacteriophage IME-DE1 Kang,H. 2020-11-19 — GenBank