Protein

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Genbank accession
XMN81927.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,89
Protein sequence
MALIYHYTRNEDGTFNVVRYRDNPMNFVVNNVPDGVPIRIFIDEICEDNDVTEDFDALKEDAIFYIVESAGGGVVKGVMKIFSVILKPLAKLLSPSAKGLSSNFANSQADSPNNSLTDRNNKPRPYERSYDICGTVQTVPNNLMTTYKIFNDTGRIIEYGYYDAGRGHLDIKAEDVTDGDTRVQDIDGSSVAIYAPYTSPNNTSTPQLQIGEVIDQQLYTTIESNEIDGITLRAPNDLGVTFSGETAVVTLSGTTGRITETAGGVDFTEDFSVGDIANLNAWTTNTVNIGDHYTVTSVSETVIELDVSSRLLSWSSASGNPIRGSDGENSIRPTDTLDKTLTDWVSINRSTVERIVVNIAAPNGMYKDNGSKLTMSATAEVQYQALDESGAPFGPIYTATGTITGRSSDYNGVTIYGYLPTASRVRVRARRTSDTDRGFNGTVSDEIVYANLYGQSVDTTPHYGNRTTVHSARKQTPRATEVRQPQLRMIATEMVFKYLGGGVFDTVMTPNKQAVQSLIRLARDPVVGGLDLSVANMDALLETQEEVESYFGSSDAGEFCYTFDDYKTTMQEIVTIIAEAIFCTPYRKGADILLDFERPRLGPEMVFTHRSKVKTSEKWSRTFNDPQVFDSLKFSYIDPVTNVKETISIPETGGLKTETYDSKGVRNKKQAYWLAHRRHQKNILRKVNVSFTATEEGIFARPNRPISVVKGSRMATYDGYITSVDGLTVHLSSPVQFTAGEPHSLVLKTRDGGAQSIPVIEGPDNRSVIMLSVPQEAIYTGNSALKTEFSFGSDGRHAAQMIMVSTVEPSDDRTVRITGFNYDADYYKYDGVSPFGRAFSDGFSNGFS
Physico‐chemical
properties
protein length:848 AA
molecular weight: 93316,80080 Da
isoelectric point:5,00032
aromaticity:0,09080
hydropathy:-0,36804

Domains

Domains [InterPro]
DC_0118
STR
1–681
DC_0118 DC_0808
NF040662
Unmapped
350–828
NF040662
XMN81927.1
1 848
Architecture
STR
RBD
STR 1-681 | RBD 699-842 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XMN81927.1
1 848
Domain Start End Length (AA) Confidence
N-terminal 1 226 226 0,9869
Central domain 227 425 200 0,5037
C-terminal 426 848 422 0,1770
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-226
Central
227-425
C-terminal
426-848

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage W5_chr3
[NCBI] 		3385020 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella typhimurium
[NCBI] 		90371 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XMN81927.1 [NCBI]
Genbank nucleotide accession
PP996006.1 [NCBI]
CDS location
range 40467 -> 43013
strand -
CDS
TTGGCGCTGATATACCACTACACAAGAAACGAGGATGGTACTTTTAACGTGGTTCGATACCGCGACAACCCTATGAATTTTGTAGTAAATAATGTGCCTGATGGGGTTCCTATTCGCATATTTATCGATGAAATATGTGAAGATAACGACGTAACAGAAGATTTTGATGCGTTAAAAGAAGATGCAATCTTTTATATTGTTGAGTCTGCGGGGGGTGGCGTTGTAAAAGGGGTAATGAAAATATTCAGCGTCATCCTTAAACCACTTGCAAAGCTTTTAAGCCCATCGGCAAAAGGCTTATCTTCTAATTTTGCAAACTCGCAGGCGGACTCGCCAAACAATAGCCTTACAGACCGCAACAATAAGCCACGACCATATGAGCGCAGTTATGACATATGTGGCACGGTACAAACCGTACCGAATAATCTTATGACAACGTACAAAATATTCAATGATACGGGCCGCATCATTGAATATGGGTATTATGACGCCGGGAGAGGTCATCTCGATATAAAAGCGGAAGATGTTACCGATGGGGACACGCGGGTGCAGGATATTGACGGGTCGTCCGTCGCGATATACGCCCCGTACACATCACCTAATAACACATCAACACCACAGTTACAGATAGGAGAGGTTATAGACCAGCAGTTGTACACCACTATAGAGTCCAACGAGATAGACGGCATAACGCTTAGGGCCCCAAATGATTTAGGCGTAACATTCAGCGGAGAGACGGCAGTAGTTACGTTGTCGGGGACAACAGGAAGAATAACAGAAACTGCCGGTGGGGTTGACTTCACAGAAGATTTTTCTGTAGGCGATATCGCTAACTTAAATGCCTGGACAACTAACACCGTTAATATAGGAGACCATTACACCGTAACATCGGTGTCAGAAACAGTTATTGAACTGGATGTATCATCGAGGCTATTGTCTTGGTCGAGCGCAAGCGGCAACCCTATCAGGGGGAGCGACGGTGAAAACAGTATCAGACCAACGGACACGCTAGATAAAACATTAACGGACTGGGTGTCTATAAATAGGAGTACCGTAGAGCGTATAGTGGTTAATATCGCCGCGCCAAATGGTATGTATAAAGATAATGGCAGCAAATTAACGATGTCTGCAACCGCCGAGGTGCAATATCAGGCCCTGGATGAGAGTGGAGCGCCGTTCGGGCCCATATACACCGCCACGGGAACAATAACAGGTCGTAGCTCAGATTATAATGGAGTTACGATATATGGCTATCTACCGACCGCGTCCCGTGTCCGGGTTAGAGCGCGTCGCACATCAGACACCGATAGAGGTTTTAATGGCACCGTTTCGGACGAAATTGTATACGCTAACCTGTACGGTCAGTCTGTGGACACAACCCCACACTATGGTAATAGAACAACAGTACATTCGGCGCGAAAACAAACCCCCAGGGCGACGGAAGTTAGGCAACCACAGCTACGTATGATTGCCACCGAAATGGTATTCAAATACTTGGGGGGTGGAGTTTTTGATACGGTAATGACACCAAATAAACAAGCTGTTCAGTCTCTTATTCGGCTAGCTAGGGACCCGGTAGTTGGTGGTCTTGATTTATCTGTAGCTAATATGGATGCGCTTTTAGAGACTCAAGAAGAAGTCGAGTCGTATTTCGGTTCTTCTGACGCTGGTGAGTTTTGCTACACGTTCGATGATTATAAGACCACAATGCAGGAAATAGTTACCATTATTGCCGAGGCTATATTCTGCACTCCATATCGAAAAGGTGCGGATATACTTTTAGATTTTGAACGTCCGCGATTAGGGCCGGAGATGGTGTTTACCCACCGCAGTAAAGTAAAAACGTCTGAGAAATGGTCACGAACATTCAATGACCCCCAGGTTTTTGACAGCCTTAAATTCTCGTACATAGACCCCGTAACAAACGTTAAGGAGACAATATCTATCCCTGAAACAGGAGGTTTAAAGACCGAGACGTACGACTCTAAAGGGGTTCGCAATAAAAAACAAGCATACTGGCTGGCGCACAGACGGCATCAAAAAAATATCTTACGCAAAGTTAACGTATCATTCACCGCAACCGAAGAAGGTATTTTTGCACGACCAAACCGCCCGATATCTGTGGTTAAAGGCTCGCGCATGGCTACTTATGATGGCTATATAACTTCAGTAGACGGTTTAACGGTTCACTTGTCGTCGCCAGTACAGTTTACCGCAGGGGAACCACATTCGCTGGTACTGAAAACTCGCGATGGTGGCGCGCAAAGCATTCCGGTAATAGAAGGGCCTGACAATCGTTCTGTAATAATGCTTTCAGTACCGCAGGAAGCCATCTATACTGGTAACAGCGCGCTGAAGACAGAATTTTCCTTCGGCAGCGATGGCCGCCATGCGGCGCAAATGATTATGGTCAGCACCGTAGAACCGAGCGACGATAGAACCGTGCGCATCACTGGGTTCAATTACGATGCCGATTACTACAAATACGATGGCGTTTCGCCATTTGGCCGCGCGTTTAGCGACGGATTCAGCAACGGTTTTAGTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
fd9d123272950c29591afa5015a8d2b169516c218443a8b1ee10624d4fce0fb8
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8489
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50