Protein

View in Explore
Genbank accession
AFV51415.1 [GenBank]
Protein name
putative phage tail fiber protein
RBP type
TF
Evidence RBPdetect
Probability 0,74
TF
Evidence RBPdetect2
Probability 0,91
TF
Evidence Phold
Probability 1,00
Protein sequence
MAGMVIHITDAGRAALVAGGNTGTAARRVVEIGLGTAPFAFDRGMKTMPNERKRVTTFGGENVAPDTVHVVIQDDTSDQYSLYAFGLYLDNGVLFAVYVQDAPILEKSPAAMMLLATDVVFATIDAAKLEFGPATFLNPPATTERKGVVELATQAEVDAGDDDTRAITPKTAKRRYAALSGATFDGRVRVFADVDDRAAQLDVSPKTAGVGKAGKARLFGTFGNATLPDLSPRLVATLRAGFDAGAWGREYVDVCLNDGTNNDAASDAKQKRVARFASGGRVLIGERADDGKTALQVRGGVDASEGVAARAIDAGGAGGQFRAVYDGYGAFIRNDGRSVYFLSTPKGAPDGGFNDYRPFSWSLSTGQVIVDGSGAGTVFGGAVDVARDLEVGRQASEGHIKLGPVDGYLYANPVSTGWWSPAGSSYQYIFADHTFRIDGRMAWHEGNLDPLDKSKGGTLAGDVSFAPGKRLVLAEGSPAAPSLTFGNDGAPDTGLYHAADGEFGVACNARAVVRFSSSLVAFEQPVTVPTPPAADRSTRAATTEWVRTVLSATTIGQIVFEPRTTVRPGFLKANGVLVNRADYPELWAYAQASGALVSDADWMKDRWGCFSTGDGATTFRLPELRGEFIRCWSDARGGVDATRQIGAFQGDQNHTHAHGAAASEAPDHVHTAWTDVQGWHGHHGWTNAVGDHQHVSPWGEHPQMYNPPWGTWGAANNRGAEGSDNDNVYGMTSPAGNHNHEFNTEGNGNHGHAVGIGGGGRHAHAIAVQPDGGDEARPRNVALLALIRAY
Physico‐chemical
properties
protein length:790 AA
molecular weight: 83355,29100 Da
isoelectric point:5,69268
aromaticity:0,08861
hydropathy:-0,28278

Domains

Domains [InterPro]
IPR048390
295–359
IPR048390 SSF88874
IPR037053
552–631
IPR037053
AFV51415.1
1 790
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Burkholderia phage phiX216
[NCBI] 		1235712 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AFV51415.1 [NCBI]
Genbank nucleotide accession
JX681814 [NCBI]
CDS location
range 14669 -> 17041
strand +
CDS
ATGGCAGGAATGGTCATCCACATTACCGACGCCGGCCGCGCGGCCCTGGTCGCCGGCGGCAACACCGGCACGGCCGCGCGCCGCGTCGTCGAAATCGGGCTCGGCACCGCGCCGTTCGCGTTCGATCGCGGCATGAAGACGATGCCGAACGAGCGCAAGCGCGTGACGACGTTCGGTGGCGAAAACGTCGCGCCGGACACGGTGCATGTCGTGATCCAGGACGACACGAGCGATCAGTATTCGCTGTACGCGTTCGGCCTGTATCTCGACAACGGCGTGCTGTTCGCCGTGTACGTGCAGGACGCGCCGATTCTCGAAAAATCCCCCGCGGCGATGATGCTGCTCGCGACCGATGTCGTTTTCGCGACGATCGACGCAGCCAAGCTCGAGTTCGGGCCGGCGACGTTCCTGAATCCGCCGGCGACGACCGAGCGCAAGGGCGTGGTCGAGCTCGCCACGCAGGCCGAAGTGGACGCCGGCGACGACGACACGCGCGCGATCACGCCGAAGACGGCGAAGCGGCGCTACGCGGCGCTCTCGGGCGCGACGTTCGACGGGCGCGTGCGCGTCTTCGCCGATGTCGACGATCGCGCCGCGCAGCTCGACGTGTCGCCGAAGACGGCCGGCGTCGGCAAGGCCGGCAAGGCGCGCCTGTTCGGCACGTTCGGCAACGCGACGCTGCCCGATCTGAGCCCGCGCCTGGTCGCGACGCTGCGCGCGGGATTCGACGCCGGCGCGTGGGGGCGCGAATACGTCGACGTTTGCCTGAACGACGGCACGAACAACGATGCGGCGAGCGACGCGAAGCAGAAGCGCGTCGCACGCTTCGCGTCGGGCGGCCGCGTGCTGATCGGCGAGCGCGCGGACGACGGCAAGACCGCGCTGCAGGTGCGCGGCGGCGTCGACGCATCGGAAGGCGTCGCCGCACGCGCGATCGACGCCGGCGGCGCCGGCGGGCAGTTCCGCGCCGTGTACGACGGCTACGGCGCGTTCATCCGCAACGACGGCCGGAGCGTCTATTTCCTGTCGACACCGAAGGGGGCCCCGGACGGCGGCTTCAATGACTATCGGCCGTTCTCGTGGTCGCTGTCGACAGGGCAGGTGATCGTCGACGGCAGCGGAGCGGGCACGGTCTTCGGCGGCGCCGTGGACGTCGCGCGCGACCTCGAAGTCGGTCGGCAGGCAAGCGAAGGGCATATCAAGCTCGGGCCGGTCGACGGCTACCTCTACGCGAACCCGGTCAGCACCGGTTGGTGGTCGCCGGCGGGATCGTCCTATCAGTACATCTTCGCCGATCACACGTTTCGCATTGACGGGCGGATGGCGTGGCACGAAGGCAACCTCGACCCGCTCGACAAGAGCAAGGGCGGCACGCTGGCCGGCGATGTGTCGTTCGCGCCGGGCAAGCGGCTCGTGCTCGCCGAAGGCAGCCCGGCCGCGCCGTCGCTCACGTTCGGCAACGACGGCGCGCCGGATACCGGCCTCTATCACGCAGCCGACGGCGAGTTCGGCGTGGCCTGCAACGCGCGCGCCGTCGTGCGGTTCTCGTCGTCGCTCGTGGCCTTCGAGCAACCCGTGACCGTGCCGACGCCGCCGGCGGCGGATCGATCGACGCGCGCCGCGACGACGGAATGGGTGCGCACGGTTCTGTCGGCGACGACGATCGGCCAGATTGTCTTCGAGCCGCGCACGACCGTACGGCCGGGCTTCCTCAAGGCGAACGGCGTGCTCGTGAACCGTGCCGACTATCCCGAGCTGTGGGCGTATGCGCAGGCGAGCGGCGCGCTCGTCTCCGATGCGGACTGGATGAAGGATCGGTGGGGCTGTTTCTCGACCGGCGACGGCGCGACGACGTTTCGCCTGCCCGAGCTGCGCGGCGAATTCATTCGTTGCTGGTCCGATGCGCGCGGCGGCGTCGATGCGACGCGCCAAATCGGCGCCTTCCAGGGCGACCAGAACCACACGCACGCACACGGCGCCGCGGCAAGCGAAGCGCCGGACCACGTCCACACCGCGTGGACCGACGTGCAGGGCTGGCACGGCCACCACGGTTGGACGAACGCTGTGGGCGACCACCAGCACGTCTCGCCGTGGGGCGAGCACCCGCAGATGTACAACCCGCCGTGGGGCACGTGGGGCGCCGCCAACAACCGCGGCGCGGAGGGCAGCGACAACGACAACGTGTACGGGATGACGAGCCCGGCCGGCAACCACAACCACGAATTCAACACCGAAGGCAACGGCAATCACGGGCACGCCGTCGGTATCGGCGGCGGTGGCCGGCACGCGCACGCGATCGCCGTTCAACCCGACGGCGGCGACGAAGCGCGCCCGCGCAACGTCGCGCTGCTCGCGCTGATTCGCGCCTACTAA

Tertiary structure

PDB ID
79969b34561467cf6db3f56f036a98f0e8f5e6ec074e33539ec8429a5e107874
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7551
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
phiX216, a P2-like bacteriophage with broad Burkholderia pseudomallei and B. mallei strain infectivity Kvitko,B.H., Cox,C.R., Deshazer,D., Johnson,S.L., Voorhees,K.J. and Schweizer,H.P. 2012 23217012 GenBank