Phage RBP Database

Genbank accession

UOK17020.1 [GenBank]

Protein name

tail fiber protein

RBP type

TF

Evidence Phold

Probability 1,00

Seq2Symm

C2 confidence 0,834

C2	0,834
C6	0,529
C1	0,017

Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).

Protein sequence

MIRLNDSLSTSTQERVAVLDAKTLEVLFQAASPMRVSVKESKRATKFAVEDGTERSDHVVRELIEVQIDFVLTADVRNAFQSLRQAHEQNKLVSVQTKVRLYENLLITDIPHDETPEFGMAIAVPVRLQEFLQVKPEYGTLPPEKVAKKNQSSTVQRGQQTGSEREESSILGRGARGARKWFS

Physico‐chemical properties

protein length:	183 AA
molecular weight:	20607,13220 Da
isoelectric point:	7,99081
aromaticity:	0,05464
hydropathy:	-0,47104

Domain architecture

UOK17020.1

1 183 aa

ATT 36–142 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

IPR048494
ATT

IPR048494

UOK17020.1

1183 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_0601
STR

DC_0601

UOK17020.1

1183 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR048494	ATT	DC_0432	36	142	InterPro cluster	Dit-like phage tail protein, N-terminal domain	Central	Medium	Text match	416 proteins / 416 hits

Proteins with similar domain architecture

Phage

Bordetella phage vB_BaM-IFTN1 [NCBI] · taxon 2928717

Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes

Host

Bordetella avium [NCBI] · taxon 521

cellular organisms Bacteria Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales

Genbank protein accession

UOK17020.1 [NCBI]

Genbank nucleotide accession

OM293950.1 [NCBI]

CDS location

range 13900 -> 14451
strand +

CDS

ATGATCCGACTGAATGACTCCTTATCGACCTCAACGCAAGAGCGAGTTGCGGTGTTGGATGCCAAGACGTTAGAGGTGCTGTTTCAGGCCGCCTCTCCTATGAGGGTGTCCGTCAAAGAGAGCAAGCGCGCCACAAAGTTTGCCGTTGAGGATGGCACGGAACGATCAGATCATGTTGTTCGTGAGCTGATCGAGGTGCAGATCGACTTTGTTCTGACGGCTGATGTCCGCAATGCTTTTCAGTCGCTGCGACAAGCGCACGAGCAAAACAAGCTGGTGTCGGTGCAGACCAAAGTCCGGCTATACGAAAACCTGCTGATTACCGACATACCGCACGACGAGACGCCGGAGTTTGGGATGGCTATCGCTGTGCCGGTCAGACTTCAGGAGTTTTTGCAGGTGAAGCCAGAGTACGGGACTTTGCCGCCTGAAAAGGTGGCGAAGAAGAACCAGTCGAGCACGGTGCAGCGCGGGCAGCAGACGGGCAGCGAGAGGGAAGAAAGCAGTATTTTGGGACGTGGCGCGAGGGGGGCGCGGAAATGGTTCAGCTAG

Title	Authors	Date	PMID	Source
Isolation and characterization of Bordetella avium bacteriophages	Serian,D., Churin,Y., Kehrenberg,C. and Hammerl,J.A.	2023-06-15	—	GenBank

Protein

Domains

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)

Literature